NONHSAT127471
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127471 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
841 nt |
Genomic location |
chr8-:82626675..82645138 |
Exon number |
5 |
Exons |
82626675..82627153,82627222..82627349,82629484..82629523,82630417..82630459,82644988..82645138 |
Genome context |
|
Sequence |
000001 GGGGACCTCA GTGGTGTGGG CCGATTGTCC CCAAGGGAAA GGCTAGAGGC AGATGGGCTC CCGCCTGTGG GCCAGACCCC 000080
000081 AGCCTACCTC GCTTATTCTG CGTGCCGTGC TTCTTGGCCA GGGCGATTTC TCTCTGGATT CGATTTTCCA GATTTTCTTC 000160 000161 CATTTGTGTG TGATGATTGT TCAGGAATAT TTTGCCTTGA ACACAGAAGC AGGGAGTCTC ATGGTTGTCC TGAGGTGACT 000240 000241 GTAATCAATG AGAGACTGAA GACAGATCAA CATACATCTT ACCCATGCTC TTTCAAAGAC TGTGCTGAGA GAGAACTTGT 000320 000321 GGCAGTTATA TGTCCTTATT GTGAGAAGAA TTTTTGCCTG AGTGTCACTC TTCTGTTGCT CATAGACACC GTCATCAGTC 000400 000401 AGATCATGAG TGTGAAAAAC TGGAAATCCC AAAGCCTCGA ATGGCTGCCA CTCAGAAACT TGTTAAAGAC ATTATTGGTA 000480 000481 AGTATCTAGA AAGCGTGTTT TGTTGCTTTC CTAGTTCCAG AGCTCCTGCT TCTTATATCT ACTTTCCAAT TATGGGAGGC 000560 000561 ATCATTAATA ACCCCAGTGG TATTCGTATT AACTTGTATT TTGATGATAT TCTTGTGACA GTATTTCTTA TGAGGTCTAC 000640 000641 CTGACCGATG GAAATTTGGA AATTATTTGG AGGTACTCCA CTGTAAGTAC TTATCTCTTT TGCTGAGCCA CTTAGATTAG 000720 000721 CTAGTTAACC ATTGGGCTAG AAATGGTATT CATGAGATTG AAGTAGTCAG CTGCTTTCTC TACAGATTAA ACTCTAAGCC 000800 000801 TAGTCAGCTG TTCTGTGAAT GCTGCTGATA ATAAGAGATA C |
Predicted Small Protein
Name | NONHSAT127471_smProtein_440:643 |
Length | 68 |
Molecular weight | 7511.8216 |
Aromaticity | 0.134328358209 |
Instability index | 41.2343283582 |
Isoelectric point | 8.70904541016 |
Runs | 12 |
Runs residual | 0.0357896381965 |
Runs probability | 0.0576679620797 |
Amino acid sequence | MAATQKLVKDIIGKYLESVFCCFPSSRAPASYIYFPIMGGIINNPSGIRINLYFDDILVT VFLMRST |
Secondary structure | LLHHHHHHHHHHHHHHHHEEEELLLLLLLLLEEEELLLLEEELLLLLEEEEEEELLEEEE EEEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHH HHHHHHH |
PiMo | oooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTT TTTTTTT |