NONHSAT127312
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127312 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1471 nt |
Genomic location |
chr8-:76135352..76190716 |
Exon number |
3 |
Exons |
76135352..76136593,76189222..76189325,76190592..76190716 |
Genome context |
|
Sequence |
000001 tgagatgaag ccggtacctc agatggaaat gcggaaatca ccgtcttctg tgtcgctcag gctgggagct gtagaccgga 000080
000081 gctgttccta ttcggccatc ttggctcctc tcccTCTTTA AAgtgattgc tcactgatgc cttatctagt tctcttggtg 000160 000161 aggtcatgtt ttcctggatg gtcttggtgt ttgtggatgt tcatcaatgt cagggcattg agaagttaga atgtgatttt 000240 000241 gaagaaagga ggaaagatgt gaaaagtgat tggtcagcca cattcatggt gttgagaaaa gaatttgctt ttctggaaca 000320 000321 tagcctgtga tagcagaaca acacctggca agaaacaggt tatgtttGGC TGGAGAGTCA TTGGCACTAT CAAGAAATAT 000400 000401 TAAAGTGTAG ATTTGAGAGA GGAGGAGAAA GACCCAAGCA AAATTGAAAA CCAGGTGGGA CCCAGACAGC AGCAAAGCAA 000480 000481 TGGAAGCATG TATTTTGGTC AATATAGAGT TAATACACAA TTTTGCCCCT CTTCTTCTGA TCATGGGACT CATATTACCA 000560 000561 GTCTTCACAT TTCCTTTAAA TTCAGGAATC AGGAAGAATT TCCAGAGTTT GCAGATGGAC ACATTTGCTG CTTCCATTCT 000640 000641 AAACATAAGT TAGAAGAACC TTTCAACTGG ATTCCAACTT TAATATGTCA CAAACATAAA AAAGAAAGCT ATTTCCTGGA 000720 000721 CTTTTCTTCA TTAGAAATTA ATAGATTGTc aattggcata gggaaaagat aatcaacaga tgccaacccc aagttaacag 000800 000801 aaatgctaaa attataagac aaagacttca aaatagctat tttaattttg cctagtgagg taaatgcaaa catgctcact 000880 000881 atgaatgaaa acaggtaatc tcagcagtca tgtaaactat aaaaataagc aaatataaat tttagaatta aaacacaata 000960 000961 tctaaaaata aattcacctg atattctcaa tagaaaaaat ggtaatgcag agaaaaatgt atgaaaatat ggcaatttga 001040 001041 agaagagaga agagatcaat aaaataaata agtatatcct tggagacctg tggatgtttt ttgaaaagtg aatcatgtaa 001120 001121 gtaattgaag tcccagaaga aaagaaaaga agaggatgag cagaaaaaaa tttctgaaaa aatatctgaa agcttaaaca 001200 001201 ctataatgaa agacacacat ttacaaactc aagaagttta gtaaaccaaa aacaataaaa tcaaagagaa ctgtgccaag 001280 001281 cgacatcatt ttcaacctgc tgaagatctt gacagcagtc agagaaaaaa gacacactta ttacacagag aggaacaata 001360 001361 cattaaatac tagcacactt ctcatcagag atcattaagc ccagaagaca gtggaatgag atctttaaag tgctgaaata 001440 001441 aaataaatgt tgattaaaaa attctatagc t |
Predicted Small Protein
Name | NONHSAT127312_smProtein_479:652 |
Length | 58 |
Molecular weight | 6347.5749 |
Aromaticity | 0.0877192982456 |
Instability index | 78.9894736842 |
Isoelectric point | 5.42608642578 |
Runs | 7 |
Runs residual | 0.0311403508772 |
Runs probability | 0.0333989451636 |
Amino acid sequence | MEACILVNIELIHNFAPLLLIMGLILPVFTFPLNSGIRKNFQSLQMDTFAASILNIS |
Secondary structure | LEEEEEELHHHHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiii |