NONHSAT127312

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT127312

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1471 nt

Genomic location

chr8-:76135352..76190716

Exon number

3

Exons

76135352..76136593,76189222..76189325,76190592..76190716

Genome context

Sequence
000001 tgagatgaag ccggtacctc agatggaaat gcggaaatca ccgtcttctg tgtcgctcag gctgggagct gtagaccgga 000080
000081 gctgttccta ttcggccatc ttggctcctc tcccTCTTTA AAgtgattgc tcactgatgc cttatctagt tctcttggtg 000160
000161 aggtcatgtt ttcctggatg gtcttggtgt ttgtggatgt tcatcaatgt cagggcattg agaagttaga atgtgatttt 000240
000241 gaagaaagga ggaaagatgt gaaaagtgat tggtcagcca cattcatggt gttgagaaaa gaatttgctt ttctggaaca 000320
000321 tagcctgtga tagcagaaca acacctggca agaaacaggt tatgtttGGC TGGAGAGTCA TTGGCACTAT CAAGAAATAT 000400
000401 TAAAGTGTAG ATTTGAGAGA GGAGGAGAAA GACCCAAGCA AAATTGAAAA CCAGGTGGGA CCCAGACAGC AGCAAAGCAA 000480
000481 TGGAAGCATG TATTTTGGTC AATATAGAGT TAATACACAA TTTTGCCCCT CTTCTTCTGA TCATGGGACT CATATTACCA 000560
000561 GTCTTCACAT TTCCTTTAAA TTCAGGAATC AGGAAGAATT TCCAGAGTTT GCAGATGGAC ACATTTGCTG CTTCCATTCT 000640
000641 AAACATAAGT TAGAAGAACC TTTCAACTGG ATTCCAACTT TAATATGTCA CAAACATAAA AAAGAAAGCT ATTTCCTGGA 000720
000721 CTTTTCTTCA TTAGAAATTA ATAGATTGTc aattggcata gggaaaagat aatcaacaga tgccaacccc aagttaacag 000800
000801 aaatgctaaa attataagac aaagacttca aaatagctat tttaattttg cctagtgagg taaatgcaaa catgctcact 000880
000881 atgaatgaaa acaggtaatc tcagcagtca tgtaaactat aaaaataagc aaatataaat tttagaatta aaacacaata 000960
000961 tctaaaaata aattcacctg atattctcaa tagaaaaaat ggtaatgcag agaaaaatgt atgaaaatat ggcaatttga 001040
001041 agaagagaga agagatcaat aaaataaata agtatatcct tggagacctg tggatgtttt ttgaaaagtg aatcatgtaa 001120
001121 gtaattgaag tcccagaaga aaagaaaaga agaggatgag cagaaaaaaa tttctgaaaa aatatctgaa agcttaaaca 001200
001201 ctataatgaa agacacacat ttacaaactc aagaagttta gtaaaccaaa aacaataaaa tcaaagagaa ctgtgccaag 001280
001281 cgacatcatt ttcaacctgc tgaagatctt gacagcagtc agagaaaaaa gacacactta ttacacagag aggaacaata 001360
001361 cattaaatac tagcacactt ctcatcagag atcattaagc ccagaagaca gtggaatgag atctttaaag tgctgaaata 001440
001441 aaataaatgt tgattaaaaa attctatagc t
[back to top]

Predicted Small Protein

Name NONHSAT127312_smProtein_479:652
Length 58
Molecular weight 6347.5749
Aromaticity 0.0877192982456
Instability index 78.9894736842
Isoelectric point 5.42608642578
Runs 7
Runs residual 0.0311403508772
Runs probability 0.0333989451636
Amino acid sequence MEACILVNIELIHNFAPLLLIMGLILPVFTFPLNSGIRKNFQSLQMDTFAASILNIS
Secondary structure LEEEEEELHHHHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHHHHHHHLLL
PRMN LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiii