NONHSAT127227
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127227 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
620 nt |
Genomic location |
chr8+:73943848..73951039 |
Exon number |
2 |
Exons |
73943848..73944368,73950941..73951039 |
Genome context |
|
Sequence |
000001 AAGCTGTAAA GATAATCAAG TGATACCTGC CATTATGTAA AGGAATTTTG GAATCCGTCT TTGGGGAAAT AAAAGCCATA 000080
000081 AGAGAGAATG AAAGCTAATA CTTTGTAGTT TAAGGATTTT TTTCCTTGAT GTATCTAATT GGAAGGCCGA AAGAGTCTTG 000160 000161 TCTTTTCTTT TTTTTGCCTG CTTCTTCTGA GACATCAAAA AACATCTTGA TTTCTGCGGA GTAGATGAGA TGGAGAAAGA 000240 000241 TGAGACAGGC AACAGAAATC TTAAGAGGCC ACAGGTTAAG ATGGGGTACT AAGCAGGGAG AGCACCAAAG GAAGTAGGCC 000320 000321 AAAGTATTAA TAGAAGATCC TAGAACAGAT TAAGGCAAAT CATTTACCTG TTTTCCATTG CCTTACTATC TTTCTGGAGC 000400 000401 CAATTACAAA CTTTCCTGTT TTATTTTAGG TCTCACAAGA ATCTTTTCTT ATCTAAGTTG CAACATGGAA CCCAGCAACA 000480 000481 AGACCTTAAT AAGAAAGAAA GAAGAGTAGG AACTCCTCAA ATTACATATA TTTGTCTTAC CAAACTGACT ATGAATAAGA 000560 000561 AAGAAGGAGT GAGGAAAGGA TTATGCTTCT TAGTACTCCT AAAACATTAT CGTAAGAAAA |
Predicted Small Protein
Name | NONHSAT127227_smProtein_128:223 |
Length | 32 |
Molecular weight | 3493.0548 |
Aromaticity | 0.129032258065 |
Instability index | 91.7096774194 |
Isoelectric point | 6.08941650391 |
Runs | 7 |
Runs residual | 0.0245295698925 |
Runs probability | 0.0386100386101 |
Amino acid sequence | MYLIGRPKESCLFFFLPASSETSKNILISAE |
Secondary structure | LEEELLLLLLEEEEELLLLLLLLHHHHLLLL |
PRMN | - |
PiMo | - |