NONHSAT126105

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT126105

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2198 nt

Genomic location

chr8+:38397070..38400589

Exon number

2

Exons

38397070..38397116,38398439..38400589

Genome context

Sequence
000001 atattcaatt gtatatttgt gccacatttt ctttctctgt tgcccagaaa aaagatttgc taaaatgact gacaatacac 000080
000081 agattaatag gagaaaaagg catataaatt tattaacata caaaaacatg ggtacaatat taaatatgag acccaaaggg 000160
000161 ccagatgatt gaggcttata tatctgcttc atagggaaga gggagatggg gaaaatgcag gggttgttaa tgatttttag 000240
000241 gggaaatgaa tgggcccagg aggctcagac attatcttgt aaatgattct cctaggaaac taaacgacgc cagcaagtta 000320
000321 ccggaaggtg aggggtgaaa cttaacctgg tagataaagc ctcccaggtt atctcttggc actgcctcag aggactagat 000400
000401 gaagagtcat ctgactttag tctccattct tctctggtgg ttaatctttt ctgattattt gatgagattc ctaggaaggg 000480
000481 gatcttaaga caattgcatt tcttttggaa agaagtttcc ttagtcagat aaggaaattc taggggaagt ctctaggggg 000560
000561 atagagactc cagaagtctc tagaagtctc taggcgatag aaacagatga ggccagaaag gccttattct gaggtagctt 000640
000641 ctaagtcctt tctattttag ttcaaagtgt tcagcatacc aaagcgccat acttttgagg tgttgttttc tgagccccaa 000720
000721 catatacata ttataaagaa tttaagataa aaatagtcta ttatatttaa ccagattttt accatttttg tttctctgtc 000800
000801 ttcattcttg atgttctaaa tttctttcag gtatcctctt tcttccgttt gaagaacttt ctttagtatt tattttacaa 000880
000881 caagtctact aatgacaaat tctcttgatt tttcacttga gaacgccttt atttccctct cattcttgaa gaatattttc 000960
000961 attggatata gaattctTTT ACAAAATTGt cacataatat aaaattcacc attttaacaa ttttaaagtg tacagttcag 001040
001041 tggtttttgg tattttcata atgttgtgca accatcacta ttatctaatt ctagaagatt tcatcacctg aaaactctgt 001120
001121 acccatgaag cagtcattcc tgatatcccc cccgtcccta gccccagcaa cccctcagct gctcttcatt tctatggatt 001200
001201 tgtttatcct ggatatttca ttaaatggaa taatacaatg tgttgccttt ttttctctgg cttctttcac ttagcatGTT 001280
001281 Cttttctttt cttttctttt tttttttttg ggagagagtc tcactctgtc acccaggctg gagtgcagtg gtgcaatctc 001360
001361 gcgtcactgc aacctcaacc tcctgggttc aagcaattct tctgcctcag catcctgagt agctgggact acaggtatac 001440
001441 atcgccacgc ccaactaatt tttttgtatt ttagtagaga cggggtttca ccgtgttgcc caggctggtc tcgaactcct 001520
001521 gagctcaggc aatccgccca ccttggcctc ccaaagtgct aggattacag gcgtgagcca ctgcacccgg ccAGGATGTt 001600
001601 cccctcccct ccccttccct cccccttccc ctcccctccc ctccccctct ccattcccct cccctcccct ccccttctct 001680
001681 cctctccTGT CTTCtttctc ttttctgttt tttcttttct ttctgagaca gggtctgctc tgtcacccag gctagagtgc 001760
001761 agtagcgcga tctcagctct ctgcagcctc gacctcccag gctcaagtga cccgcccacc tcggcctctt aacatgccgg 001840
001841 gattacggac tagagccacc ccacccagcc acttAGCatg ttttaaaagt tcgtcaattt tggcatttat cagcatttca 001920
001921 ttttttatga ttgaataata gtccattgta gaaatacacc atattttgtt tatccattca tcagctgatg gacatttgag 002000
002001 tagtttcttc cttttggcta ttataaataa tgctgctatg agcaatcctg tacaagtttt tgtttgaaca cctgttttca 002080
002081 attctcttgg ttgtatacct ggggttgaat tgctaggtca tattacgttt aaattttcaa acatcctatg tttaactttt 002160
002161 tgaggaactg ccaaactgtt ttcttttttc tttttttt
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Predicted Small Protein

Name NONHSAT126105_smProtein_1595:1831
Length 79
Molecular weight 8016.1698
Aromaticity 0.0897435897436
Instability index 96.2653846154
Isoelectric point 3.91632080078
Runs 6
Runs residual 0.0567542213884
Runs probability 0.0606636047812
Amino acid sequence MFPSPPLPSPFPSPPLPLSIPLPSPPLLSSPVFFLFSVFSFLSETGSALSPRLECSSAIS
ALCSLDLPGSSDPPTSAS
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEHHHHLLLLLLLLLLLLLHHHHH
HHHLLLLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiii
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