NONHSAT126057

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT126057

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

989 nt

Genomic location

chr8+:37575097..37591274

Exon number

3

Exons

37575097..37575514,37584678..37584808,37590596..37591274

Genome context

Sequence
000001 AGAGTCCCAG GCAACAGGGA CAGAGAGACT GGCCCAGCAG GGGCTCTCTG GGCCAACTGA GCAAGGTGAC AGGGCCCAGG 000080
000081 AAAGGAGCTG TTGCCTGCAC AAGGGCAGAT GGAGTCAAGG AATCAGTGTT CATGGGATCC TGGCTGTCCC CACAGTGTCG 000160
000161 TGGCTGAACC TTACAAGAAC AGAAGCAAGT GAAGCACAGG TAGCCAGCCA CCTCAAGGGG GAAGTATTGA TAACGAAGGG 000240
000241 ACTCAAAGCA GCATAGACAT GGGATGCTGA GGGGCCAAGT GAGCAGAGCA GAGAGTGAGT GCTGCAAGTC CTCGGAGGGG 000320
000321 TCAACCGGGA CCCAAGCATC CAGAAAAGGC AGGGACCATG CAAAGGGGTC CGAAAAATGG GACCTTCAGT GGAAAGCACT 000400
000401 GAGAAGACCA TTATTCAGTC TCTGTGCCCA GAATCACTGT CTGCCAGGCT CTGGCCAACC TGTAGCCTCT CCGTGCTGAA 000480
000481 AACGACCCGC TAAAAAAGCC AAGAGGGAAG GACCCAGCAC ACAGCCGTGA ACCACATATA CACGAAGAGG GCCTAAAGTG 000560
000561 AAAAAGATAA ACTTTAAATC AAACGGAAAC TTTTTACAGC AACTTCCACT CTTGTGATAC TGAACTGAAC TGAAGCAGAA 000640
000641 GATTTTAAGA GTTGCCTGAA TCCTTTGGAC CTGCTTATTG GCTTAAAAAG TCTAATTGTG AAATTGACTT AAAAATTCCT 000720
000721 AATTGTGAAA GAAGGGGTCT CTTCTTTGGC ATGGCACTCT CACTAACAAT TTTCTTGGTA AGAGGACCCA ACAAACAGCA 000800
000801 ATAGAAATAG AAAACTATGG ATTGCTAGGT GAGAGTATTT TTTAACCTGC TTCAATCTAC AACTGCAAAA TGAACTGGCC 000880
000881 CAATTTAATT AGAAAAATTT CAGTTTCTGA CCACTGATCT ACATTACTGA AAGGTTACAT GTGAAATAAA TGTGGGGTGT 000960
000961 GTGTGAAAAA AAACAAAAAA AAAAAAAAA
[back to top]

Predicted Small Protein

Name NONHSAT126057_smProtein_263:478
Length 72
Molecular weight 7702.6288
Aromaticity 0.0422535211268
Instability index 63.7084507042
Isoelectric point 9.25982666016
Runs 7
Runs residual 0.0499629355078
Runs probability 0.021487874429
Amino acid sequence MLRGQVSRAESECCKSSEGSTGTQASRKGRDHAKGSEKWDLQWKALRRPLFSLCAQNHCL
PGSGQPVASPC
Secondary structure LLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLHHHHHHLLLLL
LLLLLLLLLLL
PRMN -
PiMo -