NONHSAT125654

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT125654

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2960 nt

Genomic location

chr8+:26307051..26310010

Exon number

1

Exons

26307051..26310010

Genome context

Sequence
000001 gcgtagggaa gaaggaaagt ggggtggagt gagcgaagag gggacaaggg actgggtgtg gagagaaaac ggagctgagt 000080
000081 ggggaggaga agaaaaggga gagaagctga gaggggTGAG CAGGAGGAGG GAGGGCGGGG CGCCTCCCAG CAGTCGGGCG 000160
000161 CAGGCCTAGG GTCCTCCCCT CCCCCAGAGG CCAACGTCCC TGGGGCGTGA TTAGCAGCTC CTTGGGGAAG AGGACGGAGC 000240
000241 CTGAGCTCCG GGCGCGGAGG TCTGGGCGGG GCGACCCGCG GCGCTGCTCG TGGCCGCGGC GATGGCGCGG GGACCGGGGA 000320
000321 GGTTTGTCCA GGAGGACGCT GGTCACACCG CGTTTCTGAA GCTTTCGATT CCTCTTCGGC TCTGCTCTCT GCAGCCGCCC 000400
000401 TGCCTTCCCT CTGCGCGTCT GAGCCGAGTc cccggcgccc aggggcgggg cggcggggTG GGGACACTCA TGGACCCCCC 000480
000481 AGCGAGGACC TGCTGGGTGC GACTACATGG TCACCCGAAG GACCCTGAGA GAGGGGCAGC TGTAGGGGGT CCTTGAAGAG 000560
000561 GGTCTGACTG CGGGGTTTGT GAGCGTCAGC GCGGGGGAGG CTTGGGCCTG GAAAGATGGG GGAGATCTGG CCGATAGAGA 000640
000641 CGTGAGTGCC CCAGAAAGGG GGGCCGAGGT GGTGGAGGCG GGCGCGCGGC TAGCTGGGGT CCAGGACAGG AGGGGCGGGA 000720
000721 GGCAGCCGGG AAGGCCTCAG GCAGGGCCAG CGAGCAGCAC CTCCTGCAGC CTGCCAAGTG CAGGTACGAG GCCACCCCTG 000800
000801 CCCTCACCTA TGTGTGACGC GTCGAGGTAA CCTTTCTGAG CGTTGACTTG TCCACATATG CCAGTGGGGC AATCTCTGAG 000880
000881 GGTGATGAAC ATGTGTAACA TATGGGAAGC TGTATAGTGG CCTTCCCAGC GTGGCTGCTT CATAAACTTA GTCCCTTTCC 000960
000961 CTCCTGGAGG AAGGAAGTCA ACCCAGAGGC TTCTCACTAA TGGGCACTTT CCTAGCACAG GTAAGCGTCA AATGGAATCA 001040
001041 AACAGAAGAG GCATCTCAGA GTTCAACAGA ACAGGTGCCT GGCCTAGCTG GCCTCCGTTT GGGGGATGAA TAAGAATCCC 001120
001121 CTTACAggcc aggtgcggtg ggtggctcac gcctgtaatc ccaacatttt gggaggccga ggcggaggga tcacgagctc 001200
001201 agaagtttga gaccagccta aacaacatgg tgaaaccccg tctctgctaa acatacaaaa attagcagga ctggtggtgc 001280
001281 acgcctgtaa ttccagctac ttgggaggct gaggcaggag aatcgcttga acccaggagg cggcggttgc agtgagccga 001360
001361 gatcctgcca ctgcactcca gcctgggtga caaagcgaga ctccatctca aaaaaaaaaa aaaaaaaTAC CCTTACAGAT 001440
001441 TGCATCTGCA TTAAGACTTA AGGTCTCAAC TTGTTGATTC TTTGCTAGGG ATTCTTATCA CAATACAAAG AATTTACTGC 001520
001521 CATTGATTGC ATCCGAATGG ACAGACACAC ACAGATGCAC ATTTCATGGG AGTGTTTCTC TCATAAGCAG AGAGAACCCT 001600
001601 TCTCAGCCTG AATTCCTTGA CTTGCAAGTC TGTGTGGGAT TCAGGATTAC AGATTTAATG ACCGAAACAT AATAGGGTCT 001680
001681 GAGAGGCGGG ATCTACAGCA GAGCTGTGGG CAAAACTGCT GGAACCAGGC AGGTCCTACC TCCACGACAC AGCATAGAGG 001760
001761 GTGACGTGTC TGAGGGCACA CAGGCTCTGG TTAGGCTTTG TGGAATTCTG ACCTCAATGA GTCACTGAAT TGTTGAGATT 001840
001841 GCCCTGGTAA GTCAGATCTT GATTCAGTTT CTCCATGGGT AAATTGGGAG CAAATATACT GGCTGTTTAA CTTCCCTTAG 001920
001921 GGTAGGTGTG GTCTTAAAAT AGCTTCTCCA AGTTGAGGCA GTTGGTGGGT GTGACTGTCA TTTCTGTGGG ATGGAGGAGT 002000
002001 TGCAGCCTTC CCGTGAGATC AGTGCCCTGG CATGGCTGAA GTGACATGGA GAGGCCAGGA GGCAGCCTGG CAGGAAGGGT 002080
002081 GGCATCCCCC AAAGGGAGGG AAGAGGGAAG CTGGAGAGGT GTGGCCGACC CTTCCCAGAG AGACTTCATG ACACTGGCAT 002160
002161 TCCCCAGGGG CAGTGTGTGG CTCTGTGAAT GTTCCAGACA TTAGCCAGGG CAGTTGAAGC CGCCCTTTAT GCCATACGTG 002240
002241 GAACTGTGCT TTAGGAAGTG GCTTAGTTGG TGGAATAATC ATTGCTGAAC CACAATGCAA CCACAAATGC CAGCAAGTGT 002320
002321 GCACCTTCTT TCCTGGTGAG TGCAATAGTC AGCCACATCC TTCTGGACCA GCCCGGCCTT GTTTCCTAAC TGGGTGGGCC 002400
002401 CTGCTTTGAT GACAGGTGCA TTCCTAGAGG TACTGTCTTC CTGCAGAGTT TTACGTAATG CAACGCCAAG AACGCTTTGA 002480
002481 TGGTGTGGGC TCTTACTGTC ATTGAAACAT CCCAACGAAC TCTCAGGGCA GCATTGAGTG AGAGCAATGG CTTGGGAGAC 002560
002561 CCTTCGTCAT CTGGTTGGGC TGGTGTGTTT GCTGCCCTTG GAAATTCTCT CAGCATTTCC GCTGTTTGTC TCCTCAGCAA 002640
002641 GCTTATTTAT GTCTTTATAC ATACACTCAG GGGACCTAAA AATAATGTTT CTCATTTCAA TCAATCTTCC TCATCCTCAA 002720
002721 CATCTCGTTC AAGCCACACC TCTATCTTCC GTCCTCCCCG ACAGCTTCAG GATTTTTCTC TGAGCTCATA GCATTCAGAG 002800
002801 TCATTTCACA CACATAATGG TCTTGAGTTG CCTGTCATTT TTAGGTTCTG AGTCtttttt ttttttcttt tttaggcagg 002880
002881 gtgctgttct gttgagcatg ctagagtgca atggtgtaat caatcatagc tagctgcagc ttcaaactcc tgggtccaag 002960
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Predicted Small Protein

Name NONHSAT125654_smProtein_2546:2782
Length 79
Molecular weight 8747.4028
Aromaticity 0.102564102564
Instability index 46.1679487179
Isoelectric point 6.36993408203
Runs 13
Runs residual 0.0329893683552
Runs probability 0.0331960920196
Amino acid sequence MAWETLRHLVGLVCLLPLEILSAFPLFVSSASLFMSLYIHSGDLKIMFLISINLPHPQHL
VQATPLSSVLPDSFRIFL
Secondary structure LHHHHHHHHHHHHHHLHHHHHHHLLHHHHHHHHHHHHHHHLLLLEEEEEEEELLLLLLLL
EELLLLLLLLLLLLEEEL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHL
LLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTi
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