NONHSAT125312
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT125312 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
493 nt |
Genomic location |
chr8+:17830182..17843772 |
Exon number |
3 |
Exons |
17830182..17830196,17842956..17843128,17843468..17843772 |
Genome context |
|
Sequence |
000001 GAGTTAAAAA CATCAAAACT GGGAGTGATT TTTCCATGTT TGAAGCTTTG CGAGATACTA TTTATTCTGA AGTAGCTACA 000080
000081 TTAATTTCTC AAAATGAATC TCGTCCACAT TTTCTTATTG AACTCTTCCA TGAGCTGCAG CTACTAAACA CAGACTACTT 000160 000161 GAGACAGAGG GCTTTATATG CATTGCAGGA CATAGTATCC AGACATATTT CTGAGAGCCA TGAAAAAGGA GAAAATGTAA 000240 000241 AGTCAGTAAA CTCTGGTACT TGGATAGCAT CAAACTCAGA ACTTACTCCT AGTGAGAGCC TTGCTACTAC TGATGATGTA 000320 000321 AGCTGATAAT GATTAGTGAA TTGTAGATAT AATTTTAGTA TGCAGTAAAT AAAAGTTAAA TAGATTATTG TCAAATTGTA 000400 000401 GGTAGACCTA ATATATTTGA TTTTCAGCTT TTTTTAAAAC TTGGGTATAA TGTGTTATTT TATTTTGAGG GCGAGATATA 000480 000481 ATATGCAATC AAA |
Predicted Small Protein
Name | NONHSAT125312_smProtein_35:325 |
Length | 97 |
Molecular weight | 10908.9237 |
Aromaticity | 0.0729166666667 |
Instability index | 53.5802083333 |
Isoelectric point | 4.75018310547 |
Runs | 13 |
Runs residual | 0.00118127147766 |
Runs probability | 0.0342559754325 |
Amino acid sequence | MFEALRDTIYSEVATLISQNESRPHFLIELFHELQLLNTDYLRQRALYALQDIVSRHISE SHEKGENVKSVNSGTWIASNSELTPSESLATTDDVS |
Secondary structure | LHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHLLHHHHHHHHHHHHHHHHHHHLH HHHLLLLEEEELLLEEEEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |