NONHSAT124527
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124527 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1328 nt |
Genomic location |
chr7+:157923421..157925794 |
Exon number |
2 |
Exons |
157923421..157924405,157925452..157925794 |
Genome context |
|
Sequence |
000001 tacgcacaAA CCAATACACA TCTACCTGAC ATACTCATAT ACATACATGC ACATATGCAC AAACCAATAC TCATCTACCC 000080
000081 Aacacacaca catacacaca cgtacataca cacacatcta cccaacacac acactcatat acacgcatgc atatacgcac 000160 000161 aaaccgatac acatctaccg acacacacac tcatacacac acatgcatat gcacaaactg acacatctac ccaacacaca 000240 000241 catatacaca aacacacaTA TGCAGAAATC GACACACTAC CTGacatact catatacaca cacttataca cacacgtaca 000320 000321 tacagacacc tgcccaacac acacacttat acacacacgc acatacacag atacacatct accaaacaca cactcatacg 000400 000401 cacatacaca catacacaca caAATACCCG AAGATGCACA TCATACCAAT ACACATCTAC CTGacataca cactcatata 000480 000481 cacacacgta catacacaca cacccaacaa acacacatac atacacacgc aaatatgcat agacacaaat acctgaacag 000560 000561 atgcacatca taaaaataca catctacccc acatacacac tcatacacat gcacatttgc acaaaccaat acacatctac 000640 000641 ccgacacaca cactcataca cacacgtata tacaaaccaa tacacatcta cccaacacac acacgaacat acaaacTGAA 000720 000721 ACACATCTAC CTGACACACG CACTCATaca cacacactta tacacacaaa ccaatacaca tctacccgac acacacactc 000800 000801 atacacacac acgggtacat acaaactgat acacagctac ccgacataca cactcataca cacacacgaa catacaaacc 000880 000881 aatacacatc tacccgacat acacactcat acacacatgc acatacacac aAACCGATAC ACATCTACCC Gacacacact 000960 000961 catacacaca tgcaaatatg cacagataca catctaccca acacacactc atatacacac acatgcgtat gcagatacac 001040 001041 acacatctac ccaacataca cactcataca cacacacacc tacccaacat acactcatat acacacacat acaAACGTGT 001120 001121 GGGTGTGTGT ACATCCAGGC AGACACGTCC TTCTCTTTGA AACACCAATT CTATCACTTG AAGAAAACAC AACACTTGTA 001200 001201 CAAAGCAAAG CATCAAATGT CAGATTCATT AACGGGGTGA CCTGAGAACG GGCCAGCCAC TTGTGCCTTG CTGGGCCCGT 001280 001281 GATGTCTGAA TTCTGAGACT CGTTAAGTTC AGATCGACAT GAGGGCGG |
Predicted Small Protein
Name | NONHSAT124527_smProtein_977:1159 |
Length | 61 |
Molecular weight | 7211.1406 |
Aromaticity | 0.0666666666667 |
Instability index | 52.0966666667 |
Isoelectric point | 10.5319213867 |
Runs | 8 |
Runs residual | 0.0164007092199 |
Runs probability | 0.0260113054231 |
Amino acid sequence | MHRYTSTQHTLIYTHMRMQIHTHLPNIHTHTHTHLPNIHSYTHTYKRVGVCTSRQTRPSL |
Secondary structure | LLEEELLLEEEHHHHHLLLLLLLLLLLLLLLLLLLLLLEEEEEEEEEEEEEELLLLLLLL |
PRMN | - |
PiMo | - |