NONHSAT123515
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123515 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
481 nt |
Genomic location |
chr7-:135107025..135194686 |
Exon number |
4 |
Exons |
135107025..135107102,135122906..135123171,135193819..135193905,135194637..135194686 |
Genome context |
|
Sequence |
000001 CGCGGCAGCC CGTGGAGTCG GCTGAGGGAA AAGCGAGGCA AGGCAGGCGG ATCCTTTCAA TATACACTTC CAGAAAAAGG 000080
000081 GAAGCCCCGT GGTGGCCCTT GAAAAGTAAA AGGAAGTTGG GAAGTGAATG AAGTGAGGTC GTCAAAGTCC TACATTTTAG 000160 000161 CTTTCAGTGC TGAACTTCCT TCTCCCTTAA ATTATTATAA ACTTTTGCTG CTGTTTAATA AACGTGAAGA TGTCTCGCAG 000240 000241 TCCTGATGCG AAGGAAGACC CTGTGGAGTG CCCTCTTTGC ATGGAGCCCT TGGAGATAGA TGATATCAAC TTTTTCCCTT 000320 000321 GCACCTGTGG CTACCAGATT TGCCGATTTT GTTGGCATCG AATTCGCACT GATGAAAATG GGCTTTGTCC TGCATGTAGA 000400 000401 AAGCCATATC CAGAAGACCC AGCAGTTTAT AAACCACTCT CCCAGGAAGA GCTGCAAAGG ATAAAGAATG AGAAAAAACA 000480 000481 G |
Predicted Small Protein
Name | NONHSAT123515_smProtein_299:463 |
Length | 55 |
Molecular weight | 6083.0944 |
Aromaticity | 0.111111111111 |
Instability index | 50.9777777778 |
Isoelectric point | 9.62493896484 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0540288187347 |
Amino acid sequence | MISTFSLAPVATRFADFVGIEFALMKMGFVLHVESHIQKTQQFINHSPRKSCKG |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHHHHHLLLEEEELHHHHHHHHHHHLLLLLLLLL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiii |