NONHSAT122784
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122784 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1106 nt |
Genomic location |
chr7+:112014379..112015484 |
Exon number |
1 |
Exons |
112014379..112015484 |
Genome context |
|
Sequence |
000001 ATGACGAATA CCCGCAAAAG ACACCCGCTA ATAAAAATTA ACTATTCAGT CATTGATCTT CCCACAGCCT CCAGCATTTC 000080
000081 TACCTGATGA AACTTTGGCT CACTTCTTGG TGCCTGCCTA ATTCTCCAAA TCATCACAGG ATTATTTTTG GCCATGCACT 000160 000161 GTTCATCAGA CACCTCAACT GCCTTCTCTT CAGTCACTCA TATCAGCTGA GAGGTAAACT ACGGATAAAT GGTCTGCTAT 000240 000241 TTTCATGCTA ATGGTGCTTC AATATTTTTC ATCTGCCTCT TCTTACACAT TGGCCAAGGG TTATACTACG GGTCATTACT 000320 000321 ATTCCCAGAA ACCTGAAATA TTGGCATTAT TCTCCTATTC ACAACTATAG CAACAACATT CATAGGCTAT GTGCTCCCAT 000400 000401 GAGCCCAAAT ATCATTCTGA GGCACTACAG TAATTACAAA TTTACTATCA GCCATCCCAT ATATTGGAAC TGACTTTGTA 000480 000481 CAATGAATCT GAGGGGGATT CTCATTTGAC AAAGCCACCC TCACACGATT TTTTGCCTTC CATTTCATCT TACCTTTCGT 000560 000561 CATTACAGCT CTAGCAACTG TTCACCTTTT ATTCTTGCAT GAAACAGAAT CTAACAACCC TTCAGGAGTT TCATCAGACC 000640 000641 CCGACAAAAT CACTTCCCCC CGACAATATA CAACCAAAGA TGTTCTAGGT TTAATTTTTC TCCTCCTCCT TCCCGACCTC 000720 000721 CTGAGCGACC CAGATAATTA CACTTTAGCC AACCCCCTCA ATACCCCACC CCACATTAAG CCAGAGCGGT ACTTTTTGTT 000800 000801 TGCATATGCA ATCTTACGAT CTATCCCTAA CAAATTAGGA GGCGTACTGG CCCTCGTATA TTCCATTCTC ATTCTAGCAG 000880 000881 TTATTCCAGT ACTTCACATG TCTAAACAAC AAAGCATAAT AAGTTATTAA GTCAATGCCT ATTCTGAATC CTAGTGGCTG 000960 000961 ACCTGCTTAC ACTCACATGA ATCAGAGGGC AGCCAGTCAA ATATCCTTTC ATTGCCATCG GACAGACAGC ATCTATCATG 001040 001041 TACTTCTCTA CCATTCTCAC CCTTATACCA CTCACTACCG TAATTGAAAA TAAACTTCTT AAATGA |
Predicted Small Protein
Name | NONHSAT122784_smProtein_86:250 |
Length | 55 |
Molecular weight | 6404.5683 |
Aromaticity | 0.12962962963 |
Instability index | 42.4537037037 |
Isoelectric point | 10.3335571289 |
Runs | 11 |
Runs residual | 0.0410117434508 |
Runs probability | 0.0290504408151 |
Amino acid sequence | MKLWLTSWCLPNSPNHHRIIFGHALFIRHLNCLLFSHSYQLRGKLRINGLLFSC |
Secondary structure | LEEEEELLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLHHHHLLEELLLLEELL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiii |