NONHSAT122757

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT122757

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1191 nt

Genomic location

chr7-:109638491..109639681

Exon number

1

Exons

109638491..109639681

Genome context

Sequence
000001 CTGTCTAACT GGAAGTTCAC TGTTCCCTGG CTTGGGTCCC TAGGCTTCCT GCCTTGGAAG CGCAGCAGCA GGCTTCATGG 000080
000081 GAAGGTGAAG AGCTTCCCTA AGGATGAACC TTCCAAGCCA TTCCACCTCA CAGCCTTCCT GGGATACAAG GCTGGTATGG 000160
000161 CCTACATCAT GTGAGAAGCT GACAGCCCAG GATCCAAGGT GAACAAGGAA GTGGTAGAGG CTGTGACAGT TGTGGAGACA 000240
000241 CCGCCCATGG TAGTTGTGGG CATTGTGGCT ATATGGAAAT CGCTCAAGGC CTCCAGACCT TCAAGACTGT CTTTGCTGAG 000320
000321 CACATCAGCA ATGAATGCAA AGGTGTTTCC ATAAGAACCG GCATAATCTA TAAAGATGGC CTTTACCAAG TACTACAAGA 000400
000401 AATGGCAGAA TGAGGATGGC AACAAGCAGC TGGAGAAGGA ATTCAACAGC ATGAAAATGT ACTGCCAAGT CATCTCTATC 000480
000481 ATTGCCCATA CTTAGATGTG CCTGCTTCCT CTGTGCCAGA AGAAGGCACG CCGATGGAGA TCCAGGTGAA CTGAGGCACT 000560
000561 GTGGCTGAGA AACTGGACTG AGCCTGGGAA ATGCTAGAGC ACCAGGTCCC TGTGAACCAA GTATTTGGGT AGGACAGGGT 000640
000641 AATTGATGCC ATTGAGGTGA CCAAGTGCAA AGGCTACAAA AGGGGTCACC AGTCATTGGC ACACCAAGAA GCTGACCCAC 000720
000721 AAGACCCACC AAAGGCTGTG TAAGGCTCCT TATATCAGGA TGTGGCATCC TGCCTGTGTG GCCTTCTCTG TGGCATGTGC 000800
000801 TGGGCAGAAA GGCTACCATC ACTGCACTGA GAATAACAAG AAAATCTGTA ACATTGGCCA TGGCTACCTT ACGAAGGATG 000880
000881 AAAAATGGAT CAAGAACAAT GCCTCCACTG ATGGTGACCT GTCCGACAAG AGCATCAACC CTCTGGGTGG CTTTGTCCAC 000960
000961 TATAATGAAA TGAACAATGA CTTTGTCATG CTGAAAGGCT GTGTGGTGGG AATCAAGAAG TGAGTGCTCA CCTCCGCAAG 001040
001041 CCTTTGATGG TGCAGACCAA GCGTCCTGCT CTGGAGAAGA CTGACCTTAA GTTCATCAAC ACTGTTTCCA GGTTTGGCCG 001120
001121 TGACCACTTC CAGACCATGG AGGAGAAGAA CCACTAAAAA AGACCAGATT GCAAAGCAAG AAGGAGCTTA A
[back to top]

Predicted Small Protein

Name NONHSAT122757_smProtein_272:412
Length 47
Molecular weight 5190.9219
Aromaticity 0.0869565217391
Instability index 44.7173913043
Isoelectric point 5.16888427734
Runs 7
Runs residual 0.00918737060041
Runs probability 0.0264466146819
Amino acid sequence MEIAQGLQTFKTVFAEHISNECKGVSIRTGIIYKDGLYQVLQEMAE
Secondary structure LHHHHHHHHHHHHHHHHHHLLLLLLEEEEEEEELLHHHHHHHHHHL
PRMN -
PiMo -