NONHSAT120310
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120310 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
574 nt |
Genomic location |
chr7-:43686815..43688353 |
Exon number |
2 |
Exons |
43686815..43687233,43688199..43688353 |
Genome context |
|
Sequence |
000001 GTGTTCTAAA GCTTGGGTTG GTAATAAATC TTGGCTGTAT GAGACTAGAG AGAACTGGGC TTTAAAAATA TGATTTTAAT 000080
000081 GTAAAATCTT TTCTAATTGC AGGACAACTT GCCTTTGATG ATTTTCAAGA GAGTTGTGCT ATGATGTGGC AAAAGTATGC 000160 000161 AGGAAGCAGG CGGTCAATGC CTCTGGGAGC AAGGATCCTT TTCCACGGTG TGTTCTATGC CGGGGGCTTT GCCATTGTGT 000240 000241 ATTACCTCAT TCAAAGTAAG TATCCTGCTA GCCGCCTGCG GCCTGACCTC CTCCTAGCCT GCTCCTGCTC CTCCATCAGA 000320 000321 GGAAATACTT GAGATGCTTT GTTTAGATTA GAGAAAGGAG GAGAGGGTGA TTTTAAAGGC TAGTCCACCA TTTCGTTGGC 000400 000401 TATAGCTTCC TCTGTATCCT GTAATCTCAG TTTTTCCAGG AGCAACGAGT ACAAATAAAA GGACCAGGAC TAATATGCAT 000480 000481 AAGAAGCCCA GCAAAGCACG ATGGGCTTTC AGTCCAGTGC ACACACAGGG GCTCCATCAA GATTCTGAGA TTATATAAAG 000560 000561 AAGGGACAGA GGGA |
Predicted Small Protein
Name | NONHSAT120310_smProtein_140:331 |
Length | 64 |
Molecular weight | 7091.2943 |
Aromaticity | 0.142857142857 |
Instability index | 80.7398412698 |
Isoelectric point | 10.1388549805 |
Runs | 10 |
Runs residual | 0.0137674117266 |
Runs probability | 0.0696078431373 |
Amino acid sequence | MMWQKYAGSRRSMPLGARILFHGVFYAGGFAIVYYLIQSKYPASRLRPDLLLACSCSSIR GNT |
Secondary structure | LHHHHHLLLLLLLLLLLEEEEEEEEELLLEEEEEEEEELLLLLLLLLLHHHEELLLLLLL LLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL LLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooooo ooo |