NONHSAT120194
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120194 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2336 nt |
Genomic location |
chr7-:39019495..39053168 |
Exon number |
7 |
Exons |
39019495..39021106,39023850..39024005,39024477..39024521,39028235..39028353,39041720..39041818,39044663..39044812,39053013..39053168 |
Genome context |
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Sequence |
000001 AAAAAAACCT ATCTAAGGAG GAGCCAAGAT GGCCGCATAG GAACAGCTCC AGTCCACAGC TCCCAGCGTG AGCGACGCAG 000080
000081 AAGACGGGTG ATTTCTGCAT TTCCATCTGA GGTACCGGGT TCTTCTCACT AGGGAGTTCC AGACAGTGGG CGCAGCAGGC 000160 000161 TTTTCTTCTT GGAGCTGAAA CAGGCGCACT GGCGAGGGTT GTGAGGAAAG GTTTGCAGCC CCCTGCCTTG GTCTGCTATA 000240 000241 GCCAGTGACA CGATCAATAC CAGGGTGAGC AGCAGAGGAA GCTCAGGGAA GATTATGAAG ATGAGAATTC ATTACCTATC 000320 000321 AAAGAAAATG CGTAAACTCT AGAAGTATTG CTTGCTCCTT TGCCACAAAG TGTACATTCA AGAGTAAATT GTTTAAAGCC 000400 000401 AAAGGGCCTT GCGCCACGTC CTTAGCCTCA GCTTTCTACT TGCTAAAATG GAAATAACAA CAGTACCTAC CTTACAGACC 000480 000481 TGGCGTGAGG ATTAAATTAT ACCAGCAAAG TGCCTGGCAC CTAGAATTTG CCTGAGTTCT GATCAATGCT AAAAACACCA 000560 000561 TTTAACAGTG CCCTTTCCTG CCTGGGAAGC CCACAAAGAT TTCGCTTTTC ACTTATTACT CATCAAACTG ACTCTGGTTC 000640 000641 ACAGTGGAAA AGAGAAGAAA AGCTGATGGA GAAATGGCAG TGAAGAAGGA GAACAAAATG TCAGAGCAAT ACTTTTGAGC 000720 000721 GACTTATCCT CTGTTCTGCA ATATTTGCAA AAGTCAGTCT ATAGACGTGA AGCCAACAGG GACCCTCAGG CCTGTGCATC 000800 000801 AGGATGGTGG GCTGCCTAAG TCCTCTGGGG ACAGCAGTGC CAGAAGGAGT ATTGGACACA GTGACCCGAC TGTATGAGAT 000880 000881 GAGAAAAAAC AAAAACAGGA GGTCCGCAGT ACTGATGAAC TAATCTGTCA CTCACAAGCT CAGGTCTGCA AAAAAAAGAA 000960 000961 ACGAAGCACT AAACATGGCC ATAAGAGATG GAAATGCAAG TCTTCATTTC TAAATGATAA TCAAACCAAC GATCAGAAAC 001040 001041 TGATTAACTG TGTAATTGAA TTGAATTGAA AATCATCCCA TGAATAACAA TCCATCCTAC CTTCAAGGGG TTAGGAAGCT 001120 001121 AACTACAGGT AATTGCTATC AGAAATCTGA TTTGATTTCC AAAAATTGTG TGAATGAACC AAGTTTCTTC ATCTTGATAT 001200 001201 ACTAGGCAGG GAGTTTGTTC TTCCAAGTAC TAGACTGCTT AATTGCTTGC TTGGGGGAGG AGAAATCCTA GGGGAAAGGC 001280 001281 ATATATGAGC AATTTCTACT CTGTGAAGCC AGCGCTGTGT CCTGAGCTGG ATCATGGCCA GAAACAGAAA AGTCTACTCT 001360 001361 TCCCTACAGT GGAAGCAACT GTGGATATTT CATCCTAGGA GTGAATGAAA AAACCTAAAG CTCATACTTC ATGGGAATCT 001440 001441 TTCAATATTC TGACTGAAAA CTGGTTATTT GCTCCTCCAA CCCAAAGCCA TCTAGGAACA GCACTCAGAA CAGGAAAAAA 001520 001521 AAAAGACAAA AATAATAATT ATTCCAAAAC GTATTTGAGC AGAAACAAAC ACAAACATTT GCATTATTAA ATGGGCTTGT 001600 001601 TCACACCTGC TGAGTAGATA TAAGACGATA TTTAAGACAA GAGCTAAAAA ATAAACCATC CCTTTCTGGT TTTGAGTGAC 001680 001681 AGCAGAGCAA TAAAAATTAT TTTCACATTC TTTTCCCTAT TGTTAGAAGT AATCATTTGA GTAAATACAC TTATCTGTGC 001760 001761 TGTAACTATT GAAATGAATC CACTTCAAAT ATGTATACCA CCTTTCTTTT TTATATTTCT AGATATGGTT TCAATATAGA 001840 001841 CTTTCTGACT TTTATGGTAT ACATATAGGA CAATATTCTA TTCTTCTTTC CTTTTAAATA CTTACTGTTT CAATTTCAAA 001920 001921 TAAAAAATCA GCATTCTAGT TTGTACATTT TAGCACAGAA ATGTTTACAA CCTTCAGCAC AATTGCTTTT GTAATTTACT 002000 002001 GACTTGGCAT TTTGAGGCGT TTTTAACAAA TTATGAGAAA TAACACCTTC AGAAAGCATG TGACTACTTT GATGCAACTA 002080 002081 TTTACAATGT ATTCATAAGA AGTCATTAAC CTGTAGAGTT CTTAGACATG TGGAACCTTT AACAATTATA CTAAAGAGTA 002160 002161 CATACAAAAT ACAGAGCTAT GTAATAATAA CTAATTTTAA ATCCTGACAA ATTAGAAGTT AAGCCTACTA TCTGTAAAAA 002240 002241 TATGTCCTGA TTCATTTTTT TAAGTATATA CCTGAGCCTT TAAAAAGTAT ATGCCTTTAC AATTGATTTC CAATAAACAA 002320 002321 TACTGAATAA CATACT |
Predicted Small Protein
Name | NONHSAT120194_smProtein_545:682 |
Length | 46 |
Molecular weight | 5329.0578 |
Aromaticity | 0.111111111111 |
Instability index | 58.9022222222 |
Isoelectric point | 9.62298583984 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0494864612512 |
Amino acid sequence | MLKTPFNSALSCLGSPQRFRFSLITHQTDSGSQWKREEKLMEKWQ |
Secondary structure | LLLLLLLLHHHLLLLLLEEEEEEEEEELLLLLHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |