NONHSAT119618
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119618 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
942 nt |
Genomic location |
chr7-:26213604..26224961 |
Exon number |
2 |
Exons |
26213604..26214402,26224819..26224961 |
Genome context |
|
Sequence |
000001 GGGATATGCA AAGCTTTAGC ACGCTGTTCA TCACGGCTCA AGTTTCTATC TGTGTCTTCA AGGTATCTAC TCCTTATCTT 000080
000081 CTGTGACTTC CCAGGCCACG GAAAAGGTTC AGAAGTAGAT TCTGGTGCAG TTGGCTGTAA GTGGAACAGG ACACACTGGC 000160 000161 ACATCCTTTT CCCACCAAAC CACAGAAAAA CATTTTTAAG TGAAGGTTGA AGAAATGGCA ATTTACAGAT GCCAGAAGAA 000240 000241 AGGATAAAAA TCAAGGCAAG ATAAGAAAAA AGGAGGCTGA TGTTCTGCTG GTCCACTTGG TTTACTGGCT TCTCTGTCTG 000320 000321 ATTGTGCCTA ACTCTGacac tgtgccttcc ctctagacac tgtagatgat gtttagtcct agctcaatca gtctctccct 000400 000401 ttgcacattt ccgttacaac cctgctcatg tgctcaagat attgctcctg ctactctccc ctctcttctg catcaacagt 000480 000481 tctttctcat ctactggaca attcgcatca gcctactatc atacacaaat acccccacct ttaaaaaccc ctcccttggt 000560 000561 cccacactag tcttcagatt ccatcccatt ttttgctccc cttgacagca aaaacctcca aagagtatct gtactcagtg 000640 000641 tattttctct tcacccatca gcaaaatttg acttagttac catctcctcc tggaaacagc ttcttcacct ggcatccaag 000720 000721 tacctctcta ttctcctacc tcatcaagaa cttctgcttt gctgattctt catccccttg atatccaaac atagcaatgt 000800 000801 cccaaggctc agttctcagg tccaccaagc actctcccac ttcacagccc ttgtatttgc agccctttct gcctgtaagc 000880 000881 tctctcaacc ctcttatcct cctgacccca ggtctcttca aatatttacc atctcagttt tc |
Predicted Small Protein
Name | NONHSAT119618_smProtein_365:604 |
Length | 80 |
Molecular weight | 8883.3821 |
Aromaticity | 0.139240506329 |
Instability index | 51.146835443 |
Isoelectric point | 8.49139404297 |
Runs | 9 |
Runs residual | 0.0263568579851 |
Runs probability | 0.0599128540305 |
Amino acid sequence | MMFSPSSISLSLCTFPLQPCSCAQDIAPATLPSLLHQQFFLIYWTIRISLLSYTNTPTFK NPSLGPTLVFRFHPIFCSP |
Secondary structure | LLLLLLLEEEEELLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLL LLLLLLEEEEEEELEELLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLL LLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiii iiiiiiiiiiiiiiiiiii |