NONHSAT118507
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118507 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
832 nt |
Genomic location |
chr6_ssto_hap7-:4106052..4106883 |
Exon number |
1 |
Exons |
4106052..4106883 |
Genome context |
|
Sequence |
000001 GCAGTGCTAA TATTATCAAT TATTAGTGTC TCTGCAACTT CAGTATCTCT TATTATTCTA ATTCTACTAA CTATTCTCGA 000080
000081 GTTCGCTGTC GCTCTTATTC AAGCTTATGT CTTCACACTA TTAGTAAGTC TTTATTTGCA TGATAATACA TAATGACCCG 000160 000161 CCAAACTCAT GCCTACCATA TAGCTGTACC TAGCCCTTGA CCACTAACAG GAGCTCTCTC GGCTCTCCTA ATAACATCTG 000240 000241 GCCTGGCCAT ATGATTTCAC TTTAATTCTA CCACTCTTTT AACTTTAGGC CTACTAACCA ACACACTGAC TATACATCAG 000320 000321 TGATGACGTG ATATTGCCCG AGAAAGTATA TTCCAAGGCC ACCACACAAC AATTGTCCTA AAAGACCTCC GATACGGGAT 000400 000401 GCTTCTATTT ATTACCTCAG AAGTATTCTT CTTCGCTGGT TTTTTCCTGG GCATTCTATC ACTCCAGTTT AGCACCGACC 000480 000481 CAAGAATTAG GAGGACATTG ACCCCCAACA GGTATTCTTC CCCTGAACCC TTTAGAAGTA TCTCTCCTAA ATACGTCTGT 000560 000561 ATTACTTGCA TCACGAGTTT CAATTACTTG AGCCCATCAC AGTCTAATAG AAGGTAACCA AAAACAAATA ATTCAAGCAG 000640 000641 TACTTACCAT GATCCTCTTA GGAGTCTATT TCACCCTTCT ACAAGTTCAG AATATTTCGA GGCCCCCTTT ATTATCTCTG 000720 000721 ATGGAATCTA TGGCTCAACA TTCTTTATAG CCACAGGCTT TCATGGACTT CATGTTATTA TTGGATCAAC AATTCTCACC 000800 000801 ACCTGCCTTC TCACCAATTA AAATTTCATT TT |
Predicted Small Protein
Name | NONHSAT118507_smProtein_398:616 |
Length | 73 |
Molecular weight | 8364.5909 |
Aromaticity | 0.166666666667 |
Instability index | 77.6319444444 |
Isoelectric point | 10.0401000977 |
Runs | 12 |
Runs residual | 0.0257502027575 |
Runs probability | 0.0518606842137 |
Amino acid sequence | MLLFITSEVFFFAGFFLGILSLQFSTDPRIRRTLTPNRYSSPEPFRSISPKYVCITCITS FNYLSPSQSNRR |
Secondary structure | LEEEEELHHHHHHHHHHHHEEEEELLLLLEEEELLLLLLLLLLLLEELLLLEEEEEEEEE EEEELLLLLLLL |
PRMN | LLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLL |
PiMo | i??????????????????????????????????????????????????????????? ???????????? |