NONHSAT118220

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT118220

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2785 nt

Genomic location

chr6_ssto_hap7-:168171..172220

Exon number

2

Exons

168171..170561,171827..172220

Genome context

Sequence
000001 TTTTCTCCCG CCTTTTCTCC TAGATGTGCC TTGTTTGCAA AATCATGTCT ATCATGTCCA CGACTCGCCT CAATTTTTTT 000080
000081 TCTTTTGTTT TTGTGGCACT TTCATTCTCT CTCAATTCTT CAAATTCACA TGGAAACCAA GGAAAACAAG CTCCGTTTTG 000160
000161 CTTTCAATAT TGATGCATTT CTGCTCTAAG GCTTTGACAC CACCCTGGGT GGCTGTGTCA AGAGATGAAA GACAAAATGA 000240
000241 AAGAGGCCGC GGAAGCACAG ACTGGCAGAA TTCCAAAACC CGAAAAACAA GCAAGGCACC AAATTAACAA GCCCAATCAC 000320
000321 ATTGGTTACA TTTCCCAGTA TTATCGAAGA TCAAGCAAGA AAGAAAAAGA CAGAAAACAA ATGCGAAACC ACAGCTTCCT 000400
000401 TGGCTCTTTT TGCCCATATG CCGAAGAGCC GAGCATTGCC GCCAAGCATT GGCACCGGCC ATGCGGAGAC TAGCGAAAGC 000480
000481 TTTGCAATTC CTCTACTTCT CAGTGATGAC TCGGGCTTTC TCCTTACATT CTTGATGGGC ATGACCGGTC CTGTCAGCTG 000560
000561 GGTGGCCAAT TTCTGTTCTT CAGCAGAACT GTCTCCCTTC TTGGGGGCCG AGGGCTTTCT GGGGAAGAGG ATGAGTTTGG 000640
000641 AGCAATACTC ATTCAGACGC TGCACATTGG CCTGCAGGGA ATCGGTGGAC TTGTTCTGCC GCCTCGGATC CACAGAGATG 000720
000721 CCAGTGGTCC GGGTCACCTT CTTGTGAATG CCCGCCACCC TGAGCTCCAG GCTGAAGCCT CTGCCGGCGC GCACCTTGAT 000800
000801 GTGATAACGC ACAGCAGGGC ACAGCACAAT GGGCCAGATG GGTCCCGACT CTCCGGGCGC GGGGCGATGC AGCGCCCTTT 000880
000881 GGCTTGCCGG GCCTTGATTC TGCGGATCTT CTGGTTGAAC CACGTGGCCA CACGCTGCTG CCAGTCCTTG TGGAAGTGGG 000960
000961 GCTTCAACAT CATGCCATTC CTGCTGGGCG CCATGGCTGC CTACGGCCCT CCTACGAAGG AAACACTTTA TAGATTTCTA 001040
001041 TAGCAGTGTT ACATAGTAAG GTTTTATGGC GAGTTTTGTA GCATGGATCA TACTACCTTA GGACTGATGG TAAAGTTTTA 001120
001121 GTCTAAGGAA AGCTCTGAAA ATTTGAAAAT Gtgtaaccac ccaatgagtt cagcttgccc actgcctaga cagaaccatt 001200
001201 tatcaagacg ggcatgcaaa gccggctgtg tgggagaccc gttttattat tattcaaatc agtctcccca agtggattgc 001280
001281 agtttttaag gataatttgg tgggtagggg accagtgagt tgggaaagtt gattagtcgg gtcggagatg aaatcagagg 001360
001361 gagtcgaagc tgtcctcttg tgttggctta atttctggat gggggccaca agaccagatg agccagttta tcgttatggg 001440
001441 tggtgctagc tgatccatag agtacagggg ctgcaaaata tctcaagaac tgatcttcgg ttttacaata gtgatgttat 001520
001521 cctgaggagc aattggggga ggtttagaat cttgcagcct ccagctgcat gactcctaaa ccataattta taatcttgtg 001600
001601 gctaatttgt tagtcctgcg aaagcagtct agtccccagg caggaagcgg gtttgttttg gaaagggctg ctattgtctt 001680
001681 tgtttcaaag ctaaactata aactaagttc ctcccaaagt taggtcagcc tacgaccagg aatgaacaag gacagcttgg 001760
001761 aggttagaag caagatggaa ttggttaggt tagatctctc actgtctcag ttgtaatttt gcgatggtgt tttcaAATGT 001840
001841 TGATTTAAAG AAGACCATAA ATTTGTGTTG CTTTCTCAGA TTTTGAGAAT AAGGACAAAA AGTGTATGTT TTAATGGGAG 001920
001921 AATCTTAAGA ATTTCACTAC TGAAGTGGAT TTCTCTGTCC ATTAACAGTG CTAAATGTTT TGTATTTCCC AGTTGGAAAA 002000
002001 ACAAAATCTG CAAGCTTTGA ATGATACTTG TTATTAGGTT TTGGTAACAG CTgttgtact attcccattt caatgctcaa 002080
002081 tagccacacg tggcatgtca tacctaccag gtggacagca cagatataga acattttcat cattgtaaaa agccctattt 002160
002161 gacaacactA ACTTAAAGTA TTAATCTTTT AGAAGAGAAA GCTTCAGTCC AACCCAAATT ACACAATTTT ACTTTTGAAA 002240
002241 ATATTGTTGA AACAACGTTC AATTTTTTAA AATTTTGGAA AACTGAATGA AATCCATTTG TAAATGCGCA AATGGTACTG 002320
002321 GAGGTGGAAA ACTGAAGCCT TGCTATAGTT TTAGTTTTTT GGAGGGTTAT GATCAACACA GAGAAGAAAA GATTCATCTA 002400
002401 CCCATAGAGC TTCTTGAGAA AAATTTTCTA ACAATAATTT TGAAAATTTG TAGTGAATTT GTTCTTGCCA TTATTTATGG 002480
002481 GTGCTTTCAT GTGCGAGGCA CATCAAAGTT CTGGGGAATG ACTTAGGCAC AACCAAATGG CTATCTTGGG AAGACCAAAG 002560
002561 TCCTTTGCTA TATATGAGAG TTTTGAGATG GCGACTACCT TTCTGTATGG TAGATTCTTG TTTTTGAATA TGCCCTCTGG 002640
002641 GTTTTCAAAA CAAATTGTTT TTACAATACC TATAGTAGTT ATCTAGGGCA TATTCTTTAG CTTCAAAAAT TCTATCTTTA 002720
002721 GAATGGGCTT CAATATTCAT AACTGAGTTA TTTTCCTCTA ATAAATCATT AACATTTTCC CATGT
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Predicted Small Protein

Name NONHSAT118220_smProtein_224:472
Length 83
Molecular weight 9653.8861
Aromaticity 0.0853658536585
Instability index 60.143902439
Isoelectric point 9.84808349609
Runs 13
Runs residual 0.0226348854398
Runs probability 0.0392292745234
Amino acid sequence MKDKMKEAAEAQTGRIPKPEKQARHQINKPNHIGYISQYYRRSSKKEKDRKQMRNHSFLG
SFCPYAEEPSIAAKHWHRPCGD
Secondary structure LHHHHHHHHHHHHLLLLLHHHHHHHHLLLLLLEEEELLEEELLLHHHHHHHHHHLLLLLL
LLLLLLLLHHHHHHHHLLLLLL
PRMN -
PiMo -