NONHSAT117701
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT117701 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
917 nt |
Genomic location |
chr6_mcf_hap5-:2701429..2702633 |
Exon number |
3 |
Exons |
2701429..2701853,2702036..2702083,2702190..2702633 |
Genome context |
|
Sequence |
000001 TTTTCTTGTC CCACTGGGGG TTTCAAGCCC CAGGTAGAAG TGTTCCCTGC CTCATTACTG GGAAGCAGCA TCCACACAGG 000080
000081 GGCTAACGCA GCCTGGGACC CTGTGTGCCA GCACTTACTC TTTTGTGCAG CACATGTGAC AATGAAGGAC AGATGTATCG 000160 000161 CCTTGATGGT TGTGGTGTTG GGGTCCTGAT TCCAGCATTC ATGAGTCAGG GGAAGGTCCC TGCTAAGGAC AGACCTTAGG 000240 000241 AGGGCAGTTG GTCCAGGACC CACACTTGCT TTCCTCGTGT TTCCTGATCC TGCCCTGGGT CTGTAGTCAT ACTTCTGGAA 000320 000321 ATTCCTTTTG GTTCCAAGAC GAGGAGGTTC CTCTAAGATC TCATGGTCCT GCTTCCTCCC AGTCCCCTCA CAGGACATTT 000400 000401 TCTTCCCACA GGTGGAAAAG GAGGGAGCTA CTCTCAGGCT GCGTCCAGCG ACAGTGCCCA GGGCTCTGAT GTGTCTCTCA 000480 000481 CAGCTTGAAA AGCCTGAGAC AGCTGTCTTG TGAGGGACCG AGATGCAGGA TTTCTTCACG CCTCCCCTTT GTGACTTCAA 000560 000561 GAGCCTCTGG CATCTCTTTC TGCAAAGGCA CCTGAATGTG TCTGCGTCCC TGTTAGCATA ATGTGAGGAG GTGGAGAGAC 000640 000641 AGCCCACCCT TGTGTCCACT GTGACCCCTG TTCCCATGCT GATCTGTGTT TCCTCCCCAG TCATCTTTCT TGTTCCAGAG 000720 000721 AGGTGGGGCT GGATGTCTCC ATCTCTGTCT CAACTTTATG TGCACTGAGC TGCAACTTCT TACTTCCCTA CTGAAAATAA 000800 000801 GAATCTGAAT ATAAATTTGT TTTCTCAAAT ATTTGCTATG AGAGGTTGAT GGATTAATTA AATAAGTCAA TTCCTGGAAT 000880 000881 TTGAAAGAGC AAATAAAGAC CTGAGAACCT TCCAGAA |
Predicted Small Protein
Name | NONHSAT117701_smProtein_362:487 |
Length | 42 |
Molecular weight | 3990.3634 |
Aromaticity | 0.0487804878049 |
Instability index | 48.5634146341 |
Isoelectric point | 5.19403076172 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0205794029324 |
Amino acid sequence | MVLLPPSPLTGHFLPTGGKGGSYSQAASSDSAQGSDVSLTA |
Secondary structure | LEELLLLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |