NONHSAT117270

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	NONHSAT117270
Source	NONCODE4.0
Same with	,
Classification	intergenic
Length	9788 nt
Genomic location	chr6_mann_hap4-:1278450..1301385
Exon number	2
Exons	1278450..1288129,1301278..1301385
Genome context
Sequence	000001 cagagggatg cccaggatga ggtgaagacg atcttggaaa tcagcccaga tgtgcatgca ccagtccacg tgtggcagga 000080 000081 ccaagggaag tgtcttcaca aagatgaggc tttgatttgt tggagaaact gttaccagaa aaacaggtcc cgatcccgac 000160 000161 cccaaaagag tattcttgga tcttgcacag gaaggaatta aaggtgagtc acagagtgca gtgagaagga gatagtttat 000240 000241 tgaaagttac tcagatacag agtaggtgtc ctcagaaagc aaaaggaaga atgcaccatc tttgttgtaa actcttctaa 000320 000321 tgtaggggtt taatctacat aaaagctaag ttaaatgtct atgtgtgggt gctctgacag catgacaaaa tttaggacct 000400 000401 attgatttaa agaaagttat ccttggcatt ttagttagta tatcaaagca tgactataat aatcttaaaa gcatatatta 000480 000481 taatgtgacg tcaggacatg tggacattct gttgtctgtc ataggcgttt gttcttgcag gcattattaa gttgtttaat 000560 000561 cagctgtaaa cctcttatga ccatgggttg tgactggcaa ggaatatgcc ttgctagttg aaagatggag ttgactttaa 000640 000641 aatggtgtca ccctggctct cctatgcttc tgtttcccca aaaaagccag gttacttgtc ctgtagaatg atccacattc 000720 000721 tgagtttggc taatgacatt ctcatggtat taacttgttt ctttatatgt tgttttttct gtTACCCACA AAATAATTCT 000800 000801 TCTGATACAC ATTTGTAATC TTACCATGCC AGCATCTGCT ACTCTTCATG TTACCAAATT TCTGTTCAAG GACCACTAAA 000880 000881 GCCACAGTCA GTGGACATTC TGAGACCTCT AGGGGAGGGT GGAGATGCTG TCCTTTAATA TAGTCTGACC CAAGCAACCT 000960 000961 CCCCACTTGG CATGGTGAAT CTAGACAAGC TAAAGAATTT ACTACGCCCC AGGCCTGCAC CAGCCCTCTC CTAAGACCTT 001040 001041 GGGCACTCTC ATTTCCCTTT TTTTTTTTTC TAAAGGAAGT CATAGTTTCT CATAACCTTT GCTAGTGATC CTGGACCTTG 001120 001121 GTTGTTCCCT GAGGCTGTGT TCTCCACACT GCTGCCATCA CTGCTACAGC AGAGGTGCAG AAAGCTCAGG AGAGAGAAGG 001200 001201 GAGGAAAAGC TGAAGATTTT GTGTTATTCA TGCTTTCCTG ACTCCGGCGA AAGTGCTTCC TCCACCTGCA ACCATTTCTG 001280 001281 TTTCTATACT GCTGAGTCTT GTGTTCCCAA GACCAAGGGA AGCCCATTTT CTTTAAAGCC AGTCACAGTT TCTGTTGGCT 001360 001361 GATGGAATAT CTGTTGTCCA GCAGTTGTAT TCCTGCTCAC AAATGCAAAA CAGTTTGATG CCACGCACAT TCCAGGGCTT 001440 001441 AGACTGGAAA TGCTGTCCCT TGCCCCTTTG TTACCTTCTG ACAGGGATCA GTCCATAGTG TAGTTGGTGT CACAACAGTC 001520 001521 CCGAAGAAGC CTTCCAATAG ATACCCAAAT GTGATTCAAA GTGGCACAGG CACACACCAC GGTGCCACAT GGTGCCTATG 001600 001601 TAAAGCAGGT ATATCAGGAA TGCTAAGCAG AGAAGTAGCA GAACACACTG ATCCCCATGT TCTCATTGTA CAGTTGGGTG 001680 001681 CAATTAAGCT GGCACAATGG ACTCTTCTCA TGGCTACTGT TCCAGTAGTG TGGATGCCCC CAAATGCTGC ATATTTACTA 001760 001761 GGACAGCCAG GCAGAGACAG CTGTGTACTA TGATACAACA GTAGTCCCTC TTAGAGGAAG TGACCTTGTT AGAAGTGGGA 001840 001841 GTTTCTGAAG CTCTTCAGCT GTTACTGGCC TGCTCTTCCA TAGCGTTACT TCAGACCTGC TGGCCCAGCT ATCCACTCCG 001920 001921 CTAACAGGTC TGTCTCTGCT AACAGGTCTA GCTCTGTCTC CTCAGCACAT GTTCTAGGCT CTGACTGCAA GTGCTGACTT 002000 002001 GGGCTCCCAG CCCCACACAG ACCCTCtgtt ccatgaaagg gccatctatg caaagtgccc cccaaatgcc aaaggagcca 002080 002081 ataaaccaag gaacaagaca gacaaatcta gttgtcagta aagagtgttt tattggggaa cttacagaca gaagcgtggt 002160 002161 cttggatggc agcaagacag gtaggtttct gcacttatta cccccacacc cagggcttat ataccacagg ggaagagtat 002240 002241 acatgctctg tgcaagacaa aggctactac tgtccagaac aggtaagaat gctaatgtgt catagcctag aatttgtata 002320 002321 acatcaaggt tgacatgttc ttacaatagg gatggtaaat aaagtgggaa tcaggagtca gtcctgggac tggggctaat 002400 002401 cagaagtcag catagagaat tagcatccaa gagggagtca cttttctctc cacaTCCCAG ccctctaatc cagctcttac 002480 002481 aatctcatgg actcacattt cccccatagt ccctgagcct tcagagaggg CTGTGGGTGA CATTTTGATG GTGTGAGTGA 002560 002561 CACATTTTAT CAATTTGTTT TCTACTTGTT AAGCAGGGGC CACAGCAACA ACACAAACAA CAGGCGATGA TATGTATGCC 002640 002641 AGGTGTAAGA CACAGAATTA AAAATGCCCT TTACCATGTT TATTCAGGAA CCAAACCAAG AGGTATAGAG CAGAACAACA 002720 002721 ATAGGAACAG AAGACTATGG GTGGAATTAA AAATGTTTAG TAGGTATTTG GTGGGCAGTT CTTCCCCATT AAACAGAATT 002800 002801 ACTGGTAGCT CCATCTCTGT TGATTAGGAA CATAGGATTG TGGGCTGGGA GTACACACCA AACATGTTGC CTGAGGGGCA 002880 002881 AAGGCGCTGG TATTATGTGT AAGGTTACAG GGGCAGCAAA GGACCATGTC AAATGGCCAG CCAGGGTGCT TCTTAAAAGG 002960 002961 GGCTGTGTTC CAGTTTATTG GTATGTGGAG TGTTTTGGCC CAGACTTCAG CAGGATCAAT GGAGACCACT TTAGTTGGTA 003040 003041 GGGAATTCCT TGCTGTCTGG AAAGAAATGC TCTATCCAAC ATAGGGGAAG TTGCTAGTCC AACCCCCATT CAAGTGTCTC 003120 003121 CTCCCTGGCT CAAGATCTTG AGGAGTTCTA AATAACCTTT GCCATTGGCC TTTTATCTGC TCAGGTCAGA GATGCATCTG 003200 003201 GTTGGACTTT CTTTACTATT ATGGTTAATG GATCCATCTC TGTGGTGGTC CTGAGTCATT GGTGTGGTGC CAGCACCATA 003280 003281 TTTGTCTCAa ctaaattaag gtttctaatg gcttgaggca aaatctttgt ctaactatga aagatattgg attttgagag 003360 003361 tgctcaaaac tgtgccttca aaataccatt tttcctttca atcaaccctg ttgcttgggg gagtatacag taagtgaaat 003440 003441 acccagtcta tgtccctttc atgcatccag tcttggacac cgtgtctggt gaaatgcatg cctcgattgc tatcaatatg 003520 003521 tggagggtat ccttacatga cactgagttg ctccaagccc ctgatggtgg ctgtttggtt tgctcttaca agggaaagct 003600 003601 tgcaacaatc ccatggcagt gtatacacat gttagtgcat actttcgtct caagattact ggcaagggtc tgatgtagtc 003680 003681 tatctaccag tctgtcacag gggtggctgt cttatgtata tgtccaggtg tatgtgggat gtggcagagg tacagacggg 003760 003761 aacaaattaa gcagtttgct accgccacca ctaaatctgc atagcagaga gccaatcctg ctccctttgc tatTTGGCAG 003840 003841 CCCATTCATG CACTGAAATC CCCACTGTGA TATGTACCTA ATCAACTAGC TCAGTATTCT AATTTTTGCT AGGATGTCTG 003920 003921 CCTCCATGTT TCTGGGAGGT GAATCTGACC AGTGTGCTGA AGCAATTAGG TCCACAGTGG GTTCCTGTAG ACTTTTCCAA 004000 004001 atgtctttcc acatatcagc tccccataag gatttttaaa ttatatacca atcatctcag gccctttggg caagccaaat 004080 004081 tgtaagaccc ttaagtactg ccagactgtc tgtacagaga actataggtg gtggctcacg ggtacaaacc aaccatgtag 004160 004161 cttggagttc tgcccattga ctgctctgtt gcattcccat ctcaaaccag atactgtctg tggttgtgca gctactactg 004240 004241 tccatacaca gggttacctt ggctcaatgc atctaagtac caagcattat caggaatgag ggccatgcct tcatgtacca 004320 004321 ttggagacat ctcctgtgag ggctccacaa taggggcagc actggactca taatgtactg gccctaagat agcatgcagt 004400 004401 tcatctctta agggatgcat ggagaaggca ctatgttgtt gcatgtatgc atggcacttt tgtaaagtgg aaacttgggc 004480 004481 aatagctgat acaggcctgg caaacactcc tacccagtcc ttgataggaa acctgttctc cctggtacca ggaaagcagc 004560 004561 agttatggat tcaacttgtg gcaagacctt ctatatcccc aggacctgtt attcaactgg gaaatagcag gtttcagtac 004640 004641 ccttccatta attgtgacta aaattctaaa ggaactgctt cccTATGCTG GACTTTATAT TTTCATCATC CAAAATTATA 004720 004721 GTTTAGTTTT ACCTTTAAAA ATATGTTTTT TGTTCTCATT TGTTCCATAG GTTTCTCCTT GAAATTTATA ttgtatggta 004800 004801 aggtttccta ttgtttgcat tttgtggatt gcacgccaag gtgtggttta atgtatttct attacctgta ttttctgtaa 004880 004881 attggtagtt tggtatagag gtttgtgtac attcagggtt tttttttttC TGTAAGTATT GATGGTTCtg taaaaggaaa 004960 004961 ataaaatctt ggggccccaa aattactaag ctaaagggaa aattcaagct gggaactgct tagggtaaac ctgcctccca 005040 005041 tctgttcaga gtcgcccctc tgctcactga gataaacaca tgtctgattc cctcatttgg aaaggctaat cggaaactca 005120 005121 aaagaatgca accatttgtc tctcatctat ctgtgacctg gaagccccct ccttgcttcg agttgtcccg cctttccaga 005200 005201 cggaatcaat ctttagctta catatgttga tcactgtctc atgtcccctt aaaatgtata aaaccaagtt gtgctctgac 005280 005281 caccAAAGTT GTGCTGAGAA GTGACACCAA AGAACATGGT GGCATAAGAA CTCCAAGGAC CCCTCCCCTC CACAGCGGCA 005360 005361 ATGTGCTTGT TGAAACACCA GTATAAAAAA ACTCGATGAG AGCTGTGATT GGATTTAGTG TTGATATATT TTTTGTAAat 005440 005441 tgtggtaaaa catgcatact atataattta ccttctaacc attttttcag tgtacaattt ggtggcagta agcacattta 005520 005521 cagtgttgtg taaccaccgc caatatccat ttccagaaca ttttcatcat cccaaacaga aactgtaccc attaaaccat 005600 005601 aactgcccat tctccctacc cccagcccct ggtaatctct attctatttt ctgtttctat gaatttgctt attctagcta 005680 005681 ctttatataa gtaaaatatc atatttgttt ttatttctgg cttatttcac ttatagtgtt ttcaaggctc atccaattag 005760 005761 aatttcattc acttttaagg ctgaataata ttccatgctt atgtgcaccg tgggttgttt atccagtcat cctctgatgg 005840 005841 acactcggtt gcttccacct tttggatatt gggtatagtg ctgctatggg cctgagtgta cacatatctg ggtgagttcc 005920 005921 tgctttcagt tcttttgggt atgcccaaaa gtggaattgt tggctcatat agtaattcta tttttacttt cttgaggaat 006000 006001 cactattctg ttttccatgg tggctgcacc actgtatact ctcaccagca gtgtacaagt gttccagttt ctccatatct 006080 006081 tcaccaacac ttggcctagt gaagtttacc atatttttat gtccttattg gcattccttt tttttttttt tttgtgaaac 006160 006161 agagtcttgc tctgttgcca ggctggagtg cagtggcaca atctcggctc gctgtaacct ccacttccca ggttcaagtg 006240 006241 attctcctac ctcagcctcc tgagtagctg ggactacagg tacctgccac catgcccaac taatatttgt atttttttgg 006320 006321 tacagacggg gtttcaccat gttggccggg atggtcttga tctcttgacc tcgtgatccg cccacctcgg cctcccaaag 006400 006401 tactgggatt acaggcatga accaccatgc ctgaccagca ttccttattt ttatgtcctt attgtatatc ttctttggag 006480 006481 aattgtctat tcatgtcttt ttcttatttt tgaatgagat tgttttgcta ttgttgaatt gtagttcttt acatattctg 006560 006561 gatattaatt ctttatcaga tatgtgattg gcaaatattt cctcctagtc tgtgcatttt cttttgattc tcttaatagt 006640 006641 gtcctttgat gcaaaaaagt ttttaaattt tgatgcattc taatttgtca tttttcttat attacttgta ctattggtca 006720 006721 ccagccaaga aaccactacc aattctaatg tccataagat tttcctcagt attttcttga gggttttaca ggttcaattc 006800 006801 ttaagattag ttctttgagt cattctgact taatttttga aaagggtgta atggaaggac atgaattttt tccagcatca 006880 006881 ttcttttgca tgttgatatc caggtttcca gcaccatttg ttgaTGCACC ATCTGTTGCA GTGGGGCTGA CACATTTGTA 006960 006961 AGATGCAGTG AGCATTAATA CATGGGAGCA CCATGCattt atttacctgt ctttacttca cagttgtttt gagaaggctt 007040 007041 tcactgacag actcaacaga aatgaatata tatgacttct tataaaatca tattcaagta aaattataaa ttttaaaatg 007120 007121 ttaagactgg agcaagactg gaacatcact agacaagcTG AAACATAGGC TGAAATGAAG GGTTATGTTT ACCTTGCTAC 007200 007201 AAATTCTGTT GGCCCACAAT CTCTTATGCT TATTGCTTAA GAGAGCCACA GAGTGGGGTG ATAGCTCACA TAACCAGTCC 007280 007281 CTGGTTTTCT GCTTCAGAAA GAAGTTTAAA TATTCTGCTT AGACAGAGTA AGGAAATTAA CTGAAAGATG TCTAATGTGA 007360 007361 AGTTGGCATC TACAAAGTGA AGGAGTGAGT AGTAAGTGTA AACATCAGGA ATCCCAGGAG ATTCTATCTT TTTGCACGGA 007440 007441 AATGGCCTCA CTATGCACTG CTGAAGGGAG AAGGTCCCTT CAGGGGACCT TCATGATGAA GAAGAACACA ATATGATATA 007520 007521 GGAATTTTCT GCTGCAGCCC TAAACTGAAT TGTCCTTCTC TCTAACTACA GGTCTCACAA AGTTTTATAG CTTCAATGAT 007600 007601 TTCACCTGGG CCAAGATTTT GTTTTTTTTG ATGTTATTTG TTTGAACTGC TGCCTGGGGC TTAGAAAAGT GACTTGGATA 007680 007681 TTTTGTCAAA ATGGATTTTC TTTGATGGAA TGTGAAATCC GTAAACACTC TGCTTTCCTG CTGTATCCCC AGAGCAGGTT 007760 007761 GAGTACCTTG CACTTCTTCT CAGCACTTCG CTAGAAGTGG TAGAAGATTT GGAGTTAGGG CCTCCCTCAA TCCCTACCCT 007840 007841 TTCTTTAATT CAGAGGATCA CAAACTGTTG GGAGAAGAGT GGTATCTTGG GCCTCTAGCT GATCTGATGA ATATTAATAT 007920 007921 CCAATGTCCT GTAGTGAAGT CATGTGTGCG TGTAACATCA CTTCTTCACG CAGTGTCATA GGAAAGTGGG TTCCTGGACC 008000 008001 CCAGGTTAAG AGCCTAAGCA CTAAAGGCAC AGAGCTAGAG CTCTAGGAGG GGAGGGATGG CTGGGGTGGA ACCTCGTCTT 008080 008081 GTCATTTAGT CCTGGGGCCT TTTCACTCCT TACATGGTGG GTGGTGGGCG TCTGGCAGGT GCCGATGTTG ATGGAGTCAA 008160 008161 GGGAGGGAAC TAGCCGGGAC AGGGAAAAAC AGGGTTGGAG AGATAATTAA GGTGGACATT ATTTTTTCTG AGCGTAAGTC 008240 008241 GTGGCTGGAA ATCTGGAGAG CCTGAAAGAG TATCCCCCTA CCCAAACCTG TTTTTTCCTT TTCCCTCAAG CCTCATTTGG 008320 008321 CCACAGGCCC AGTGTCAACA CCAGGGGGCG CCACAGACCA TGAAGGCGCC CACAGACCAT GAAGGCACCG TGCAGCTGGG 008400 008401 ATTGTTTGTG GTCGGCTACT GGGTCCCTGA CTTAACCAGG Ggagccaaga ccctgtagcc aagtggcctg gattcaacct 008480 008481 gcagctcagg tcttactgac acttctcccc ctggtgcctc agtttcttaa tctgtgaaat ggtgaggaca ttacagcatt 008560 008561 tacctctggg gCgggtttct caacagcagc actattaaca atttgggaca gagaatcttg tggagtggtc tgtcctgtgc 008640 008641 attgtgggag gtttgccagc aacaccccac tcaccccctc ccaccaatcc ccatgtgaca accgaaaatg tcccaggatt 008720 008721 tttaggtctc ccttgggTCT AGAAGCTGCA CTTAGGCATT TTCCCACCTG ACACTTGAGT TCATCTCTGC TTTGGTCCAC 008800 008801 ATAAGGCCAC TTTAAAAAAA TGTTGTTTCT TTAAAGATTC TAACCATCTT TTAAACAAAT CCATTTTCTT CCTCTATTTC 008880 008881 TGCATTCAGT TAATCCTTCC AAACCCTTTG TTTAGTATAT CTTGAAATGT ATCAATTCCT GTTCTAGTAA TTAACATATG 008960 008961 TGACTTGCAT GATATCTGCT ATGACCCCTA GTAGAGCTCT GATTCCTTTA GCACAGGGAA TGTGTTCTCG ATTCTGCTCT 009040 009041 GGATGATGTA AATCAATTTA TTTTACTTTA CTTGTCTGGG ATGTTGCTCC TCATCTGTAA GATGTAAATG TGGATATGGC 009120 009121 TTGGATTACT AAGTGGTTTT ATTTCTTAAT TCACCTGACA TTTGTTGTGT ACCTGCTGCA AGTCAAATAC ATGGCATGGT 009200 009201 ATTGTTTCCT TGTTCACACC ACAGCAAATG AGAAAATGAG ACATTATAgc caggtgtggc ggcacaggct tgtggtccta 009280 009281 gctactcgga aggctgaggc aggagaattg ctccagccca ggagtttgag gttacagtaa ggtatgatat caccattgca 009360 009361 tttcaacctg ggcaacagac cctgtctctg aaaaaaggga aaaaGACCTT GTGAGCTGTC TACGTGTACT CTATGTCTCA 009440 009441 GGAGACTCAT ATCCTGTAAT TTTTCTAAAT GGCGTCTCCA TGTGGTCttt catgaatgtt tgtctggtat tctctatcct 009520 009521 tttactttca acttttcttt accttctact gaaattatgt cttttgtaaa cagcccatga ttatttattt agttatttat 009600 009601 ttttaccccc ctgcactatt tgtcttgtaa ttggagtgtc tgagtccatt atgtttaatg taattattga cctcattggg 009680 009681 tttaagtctg tccattgtca tttgctgcct tctaatatta tctctttctt gctcaactat ttttcttatg ttaccttctt 009760 009761 tagatgaatA AAAACCTTTG CATTATTG

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