NONHSAT116699
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT116699 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
586 nt |
Genomic location |
chr6_cox_hap2-:2835588..2836266 |
Exon number |
2 |
Exons |
2835588..2835689,2835783..2836266 |
Genome context |
|
Sequence |
000001 GGAGCAGAAG TCCCTGTTCC CCGCTCAGAG ACTCGAACTT TCCAATGAAT AGGAGATTAT CCCAGGTGCC TGCATCCGCT 000080
000081 GGTGTCTGGG TTCTGTGCCC CTTCCCCACC CCAGGTGTCC TGTCCATTCT CAGGCTGGTC ACATGGGTGG TCCTAGGGTG 000160 000161 TGCCATGAGA GATGCAAAGC GCCTGAATTT TCTGACTCTT CCCATCAGAC CCCCCAAAGA CACACGTGAC CCACCACCCC 000240 000241 ATCTCTGACC ATGAGGCCAC CCTGAGGTGC TGGGCCCTGG GCTTCTACCC TGCGGAGATC ACACTGACCT GGCAGCGGGA 000320 000321 TGGCGAGGAC CAAACTCAGG ACACTGAGCT TGTGGAGACC AGACCAGCAG GAGATAGAAC CTTCCAGAAG TGGGCAGCTG 000400 000401 TGGTGGTGCC TTCTGGAGAA GAGCAGAGAT ACACATGCCA TGTACAGCAT GAGGGGCTGC CGAAGCCCCT CACCCTGAGA 000480 000481 TGGGAGCCGT CTTCCCAGTC CACCGTCCCC ATCGTGGGCA TTGTTGCTGG CCTGGCTGTC CTAGCAGTTG TGGTCATCGG 000560 000561 AGCTGTGGTC GCTGCTGTGA TGTGTA |
Predicted Small Protein
Name | NONHSAT116699_smProtein_44:247 |
Length | 68 |
Molecular weight | 7485.9141 |
Aromaticity | 0.0597014925373 |
Instability index | 47.8537313433 |
Isoelectric point | 11.2758178711 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0546482311188 |
Amino acid sequence | MNRRLSQVPASAGVWVLCPFPTPGVLSILRLVTWVVLGCAMRDAKRLNFLTLPIRPPKDT RDPPPHL |
Secondary structure | LLLEEELLLLLLLEEEELLLLLLLHHHHHHHHEEEEELEEHHHHHHLLLLLLLLLLLLLL LLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL LLLLLLL |
PiMo | ooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiii iiiiiii |