NONHSAT114156
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114156 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1609 nt |
Genomic location |
chr6-:100910479..100912765 |
Exon number |
2 |
Exons |
100910479..100911811,100912490..100912765 |
Genome context |
|
Sequence |
000001 GGCTTCCAAT TAGGAATAAT AGTGAACTGG CTTCGTAGCA ACTACGGAGG ACCAGGATTC TAAAATCACC TCACTCGTCC 000080
000081 CAAAGCTTGC ATCCTCCTCT TTCTGCCACG CACCCCTCCT CCAATTCATG ATCCAGAAAA GGGAGCCGGG AATGCTCTGC 000160 000161 TCCTCTCTGC CGGTGGGAAG CGGAGAGGCC GGCGGTGTCG CTGGGTTGGA CGGTAGGCAT GAGAACAGTT AAGAGATGGG 000240 000241 CGCCCCCGAA ACCTCTGCCG CTTGTGGGGA CTGAAGGGCC TTGAAAGAGT TGTCTGGGGT TCCTGCTCTT CCCAAAGGGG 000320 000321 CTCGGAGATA CCTTAAATGC CGCGAGACTG AAGAGCAAAC GTCAGGGATT ATTATGTCGA TTTTCCGAGG ACCAGGGTTC 000400 000401 GCAGCTGGCA GTAGAAGAAA AGGCTGGCTC CTCAGGGGTC CCACTGGCAT TTGATACCCT GAACGACCCT CAGGATTGCC 000480 000481 CAAATTCGGT GGATCGCCCA AATTCGGTGG ATCAGCAACT TTCCTATACT GCATCCCGAA TTTTCAAAGA ACATATTTTC 000560 000561 CGTTCACCCC CGCTGGTCTT TTACTGCCAT CAATACACTG TTCTTGGTGC AAATACTTCA GCCTCTTTAT TCAAAGTATG 000640 000641 TTTTATGTTT TTGCCAAATA TGATCTCTAA TTGAAAGTTT ATTTTTGGTT TTGGATGAAT CTGCGGAGCT TAAGTTGTGA 000720 000721 GAAGAAAGGG GGAACAAGAC ACAATGAAAG AAAAGTCCAA AAATGCTGCG CGGACTAGGA GGGAGAAGGA AAACAGTGAA 000800 000801 TTTTATGAAC TGGCTAAATT ACTGCCTTTG CCCTCGGCTA TCACCTCGCA GCTGGACAAA GCATCCATAA TCAGACTCAC 000880 000881 GACCAGCTAT CTCAAAATGA GAGTGGTGTT CCCAGAAGGT AAGTGACTTT GCCCAGATGG AATTTCAAAG GCAGAAGGGG 000960 000961 CCGGGGATTT GCCAGGCAAT GAGCCGACAT CAGTGACCAG AGAAATGCAT ACATATTTAC ATATATATTT TGCAAAGGGA 001040 001041 AGTTTAGCTC GGCTGCTTCA CTAAGGTCCT CACTGAACTC AGAATTTCTG TCGCTTTTTT GAGGCTCCCT CTACCTCCCC 001120 001121 ATCAATACTT TCTCTTCAGT CCATCAGATA TGTTTGGTTG GGAAGCAGCC CAACAGTCCT TTTGTCAACA CTTCAGATAC 001200 001201 TAGGCTCAAT TGAAAGTACT ACTAATCCAA ACATGACTTT CTTTTTTACT CCTCTTGTTA GAATTTTGTC CAGTAAAAAC 001280 001281 CAGGAGCACC GCCTAATTCT GTATTTTTTT TTTGCCAGGT GTGGATAGAC CCATGTACCT GGAGCTAGAT AGGCCAGATA 001360 001361 ATAATTTCTC TATATATCTA AAGATTTGCA AATGAGTAAC ATGCATATTT GTGAACAAGT ATGCCTGAAT TTACTCAAGT 001440 001441 TCTTAAATAA ATTCTAAGCA AATTTATTCC GAGTTTTCAA GACATTCGCA GATTCTGAAA CTAACTCTGG AGCTTGATGA 001520 001521 TTTGCAACTG TGGGCTTGAT GTTATCTGTA AGATAATAGG CTAGTCCTAA AATACATAAG ATTGAATTAA GATGGCTAGC 001600 001601 CCGCTTAGA |
Predicted Small Protein
Name | NONHSAT114156_smProtein_743:925 |
Length | 61 |
Molecular weight | 6914.0178 |
Aromaticity | 0.0666666666667 |
Instability index | 44.2301666667 |
Isoelectric point | 9.99176025391 |
Runs | 11 |
Runs residual | 0.0335992907801 |
Runs probability | 0.0437201907791 |
Amino acid sequence | MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGK |
Secondary structure | LLLHHHHHHHHHHHHLLLHHHHHHHHLLLLLHHHHHHLHHHHHHHHHHHLEEEEEELLLL |
PRMN | - |
PiMo | - |