NONHSAT113695
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113695 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
595 nt |
Genomic location |
chr6+:80190973..80228894 |
Exon number |
2 |
Exons |
80190973..80191157,80228485..80228894 |
Genome context |
|
Sequence |
000001 GTCTGGGTTC CTGATTTGTA TCTGTTACCC TTCATGGAAA TGGCTGGTGA AGCAAAACTA TGTGTGTAAA ACTGCATCTG 000080
000081 CCACAGGCTG CTTGTCCACA AAAGCAGCAA AGCATCTCTA TGGAATACCT CCGTATGGAT CTGTAAAGAA GAGTCCCACT 000160 000161 TCAGTCAAAG ACAGTAGATT ATGAGGTGAA GAACTGACCA GCGATGATCG GCCAGAAGAC TGTGGCGTTT CAAAATCAGA 000240 000241 TAAGTAAGAA TAATGGTGTT TGCCTGCCTT TCTTTCTTGA TCAGTACCTG GACTTCCTGC TCTTTCCCCC ATTGTTTTGA 000320 000321 AAAATGGTCT CTATTCACAT AATTTCACAG ATTATTTTCT CCAGAGGAGA CTATGACAAT ACTGAAAAAC ATTTTCACAG 000400 000401 TCTTCAGATC CTGATAATAT TCATTTCTGT GCAATCTATT TTCTCCACAA TGTATTTGTA GACCACAATT CACATTGGCA 000480 000481 TCCAGAAGAT AAACTTTTTT GCCCTGAAAT TAAGGAAGGG GAAAGGAGAC TTATCATACA GTCTCTACAG TTTCTACAGT 000560 000561 TAATTACAAT GAAAGACACT AAAAGCAAAA TAATA |
Predicted Small Protein
Name | NONHSAT113695_smProtein_323:460 |
Length | 46 |
Molecular weight | 5287.1148 |
Aromaticity | 0.133333333333 |
Instability index | 60.86 |
Isoelectric point | 6.21246337891 |
Runs | 10 |
Runs residual | 0.0599747474747 |
Runs probability | 0.0491520932698 |
Amino acid sequence | MVSIHIISQIIFSRGDYDNTEKHFHSLQILIIFISVQSIFSTMYL |
Secondary structure | LEEEEEEHHHEELLLLLLLLHHHHHHHHEEEEEEEHHHHEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTo |