NONHSAT113547

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT113547

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

537 nt

Genomic location

chr6-:73984769..74020088

Exon number

5

Exons

73984769..73984882,73985137..73985279,74001721..74001763,74019275..74019451,74020029..74020088

Genome context

Sequence
000001 CTTGGACCGC AGGGAGGGCA ACCAAATGGC AGAGGCGGTA ACGGAGAGCA TCCCTGAACG GCCAGAAACG CGAAATGCTG 000080
000081 TCGGCCTTCC AGAGGCTGTT CCGAGTCTTA TTTGTGATTG AAACAGTCTC AGAATACGGA GTCCTGATCT TCATTTATGG 000160
000161 ATGGCCCTTT CTCCAGACCC TTGCGATGCT CCTGATCGGG ACAGTGTCTT TCCACCTTTG GATCCGCAGA AATCGAGAGA 000240
000241 GAAACTCAAG GAGCGGAAAG ACTAGATGCC GATCCAAAAG GTGACCAGCC ACCAAGTAAA GCACTGATGG TTTCAGAATG 000320
000321 TGCCTAAACC TGCACCAGTG AGGCAAGTAT GCAAAAGGAG TCCCTTTCCG GGATGGACAC ACTTCCCATA GAGCCGTGTC 000400
000401 ACCCCGCACA GGGTTGCAAC CAGgctggtc tcaaattccc aacctcaggt gatctgcccg cctgggcctc ccaaagtgtt 000480
000481 gggattacag gcatgagcca ctgcacccgg ccTCAGACTG GGATCTGAAA TTAGAGA
[back to top]

Predicted Small Protein

Name NONHSAT113547_smProtein_74:283
Length 70
Molecular weight 8266.7227
Aromaticity 0.144927536232
Instability index 58.9594202899
Isoelectric point 11.6504516602
Runs 12
Runs residual 0.0345817190415
Runs probability 0.0694812459519
Amino acid sequence MLSAFQRLFRVLFVIETVSEYGVLIFIYGWPFLQTLAMLLIGTVSFHLWIRRNRERNSRS
GKTRCRSKR
Secondary structure LHHHHHHHHHEEEEEEEELLLLEEEEELLLHHHHHHHHHHHLLEEEEEEEEELLLLLLLL
LLEEEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
LLLLLLLLL
PiMo oooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiii
iiiiiiiii