NONHSAT113515

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT113515

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2957 nt

Genomic location

chr6-:72180870..72187193

Exon number

4

Exons

72180870..72182983,72183744..72183816,72185113..72185178,72186490..72187193

Genome context

Sequence
000001 ACAAAGACAG TCTGAGTGGC CCAGGCAAGC AGGGTAATTT TCCACACCTT CAGACAAATA CAGTGGAGAT ACAAAGTTTG 000080
000081 CAATGTTCTT ATTTGGCCCC CACACACTGC ACTCTGGCAG TGAGAGAGGT CAGGCTTTCA GGAGGTTATT TCTGAACCTA 000160
000161 GACAAGCATC CCACAGTGTG TGTGCACTGC TTACCCTCAG TGAAAAGTGG TTCTCATTTT TAGTGCCGTA AATCCTATGA 000240
000241 TCATCCCCTC CCTTTTCTAA CCAAAGCTGG TTCTGGAAGG TGGGCACTAC CCCACAGTGT TGATTTGGCT AGTCCTGCTT 000320
000321 CCACTGTAGC CAAAGTCACT GAGAAAGTAC TTGATTATCT TTAGGAGTAG AACAGCCAGG GTAAGCCAGT GGAAAAATGT 000400
000401 TACAGAATGA CAAGTAAGTG CTTGCTAAAA TATTTTTGGT GCTCACTTCA GGTTGACTCA GCAGGTCAGA GAAATGCGAA 000480
000481 TCCAGAAGTT AGGAGTGACC TTGGCTAAGT CACTTTATCT CTCCAGCCAT TGAAAGCTTG GATTAAATCA TAGGCTTTAG 000560
000561 AGCTAGGTTC CATGGAGCTT TGGAGTTCTG TTATACCTGT CACAGGATAG GGACCATTGA TAAAAGAGAC TCTTAGCAGA 000640
000641 TGAGAATCTG GACATCTGGG CTCGGAGAAG CTTTGATTTT ACCTGTTTTT ATACACTGAT TTAAGGGAAC CCACACAATT 000720
000721 ATACAAAAAT AAATGAAACG GTCTCCCTAT AATTGCATGG CCAAAGACCA GGGACACCAT GCCAACAGGG TCACATGGAG 000800
000801 CCTGTGCTCA GGAACAGAGT GGATGACAAG GATTGTGGGA GGCGAGATAC AGGGGTTAGA GCACAAATTG TGCAGTGCCC 000880
000881 CTTAGCATTT GATTTTTACT GAAAGATGGG AACCCAGAAA AGGGATGTGG GTAAAAGAAT GGCCTGCTAT TTGACCAACT 000960
000961 TTTCTTTTCA TCTCTCGAAG AGCCTAGCAA AGTACTGAGC ACATAAAGGC TGCTGAATAT ATTGTGACTG GTTAATTGCA 001040
001041 AAGGGAGCAA CACCTTTCTT CACTGCTTTC CACAACTTTT TACCTTAATC ACAATTAGAT GCAGGTTTAT TTCTACCTAA 001120
001121 AAATATACTT ACTGCAGAGA TATGGACACT AAGAAAGTTC AGTTTATACA TAGTCAAGGT GTGAGCCAAA ACCCATTTCT 001200
001201 TTACTGATGA GACCTGGATC TCTCATTAAA ATATCACAGG TATAATAGAA ACTAGCACAC TTACATACAG TGAAGGATAC 001280
001281 AGCCCATGCA AATTCTAGAA TTTTCTACAG ACCTCTACCA TAGGACAAGG GACATTTGAA ATTTAATATA TTAGACACAT 001360
001361 TTCACCTAGC TTTTATTCTT CATAATTTTT TTAATTTTTA ATTTTAATTT TTATAAGTTC ATAGTAGGCG TATACATTTA 001440
001441 TGGGGTACAT GAGATGTTTT GATACAGACT TGCAATGCAT AATAATTATC ACATCCTTCA TAAATTTTAT TTACATAGTG 001520
001521 GAAATATGTT TCAAGCTGTG GAGCATTTAT AAATTTATAC TGGGATAGCA TCTTAAAAAT TTTCCCTTCT ATGAATAAGT 001600
001601 TCACATGGAA AAACAGTATA TGTTATAAAT TCTGAAATCA GCAACTTGAC TCTATATTGT GCAGTTTGAC AGACAGGACT 001680
001681 CATAATTTAG TTCAGTCATG GCTTTTCTGA GTAAATATAG ATCTATCACT GACATAATTA GCCAATCTTC ATTTTCTCCC 001760
001761 ACCTTGGTCA TAGATTTGAT TTTTTATCAT TAGCATTTAG AGAGAGTAGC ATGTATAATA CAATAAAGAG TGGGATATGG 001840
001841 GACGGAAAAA TAGGAGGAAT CCCTTCACCT GCTGCAGGAA TGTGTCATTC TGAACCCTAA AGCTGATTCT ATTTGGTTTT 001920
001921 AACAAGGTAT CATCTCCAAA TCCTATCATG TTATATTATG TTAGAAACAT TAAGTTACAA TGGGAGAGTC CCAGTAAGTG 002000
002001 GAGAAAGTTG AAGGTTGTCC GATAAAATTA GGCAAGGGTT CACATGCATG CTTTGTCACA CACTTCACTT GCAGACACAT 002080
002081 CTGAAAATGC ACCCCCAACA CCCCTAACAT TGTCTTCCTG GAAAGCACCA TTTATTAACA GGACTCAAAC ATGAACTACT 002160
002161 CAATAAAGAT CTTTCTTCCT CTGTTCCTCC CTCCCAGAAC TGACAATGCA TTCATTGTAC CCTATAAACA ATTTCGTTAC 002240
002241 TGATAATATG TACCTCTAAG TCTGTTTCTC CTATTGGACT GGAAGCAATT TAAAGATAGT GATTCACTTT TATTATCTTT 002320
002321 TTATCCTGAA CTCCCAGCAC AATGCCTGGC ACATGTAGGA CTGAAGAAAT ATTGTTAATT ATTTAATTTT ATCACACTCA 002400
002401 CTAGATCCAA CATGATAACA TGAGAGAAGG AAATTCTACT TCAGCTCCAT AATTTGAGAA AGGTCATTCT TCTTTCTTAG 002480
002481 AGGCAGCACC ATTACATAAC AGAGTCACCA CTAGTGGCAG TAGAGTTTGG TGTATAAGAA GAAATGGGCT GGGCACAGTG 002560
002561 GTTCATGCCT GTAATGCCAG CACTTTGGGA GGCTGAGGCA GGCAGATCAC TTGATGTCAG GAGTTCAAGA CCAGCCTGGC 002640
002641 CTACATGGCA AAACCCTGTC ACTACTAAAA ATACAAAACT TAGTCAGGCG TGGTGGTATG CGCCTGTAAT CATGGCTGTT 002720
002721 CAGGTGACTG AGGCAGGAGA ATCATTTGAA CCTGAGAGGC AGAGGGTGCA GTGAACTGAG ATCGCGCCAC TGCACTCCAG 002800
002801 CCTGGGAGAC AGAGTGAGAC TCCATCTCAA AAAATAAAAA TGAAGAAGAA GAAAGGGATC ACTAGCCTTT AAATAATTCT 002880
002881 GTTTCAGCAT TATGATATAA GTTTTTTATT TAATGAAGTT ATTTTCATCT TCTCTTCAGC AGTAGCATCA CTTAAAA
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Predicted Small Protein

Name NONHSAT113515_smProtein_2543:2773
Length 77
Molecular weight 8805.9291
Aromaticity 0.131578947368
Instability index 69.4526315789
Isoelectric point 6.15655517578
Runs 9
Runs residual 0.0229885057471
Runs probability 0.0492453237551
Amino acid sequence MGWAQWFMPVMPALWEAEAGRSLDVRSSRPAWPTWQNPVTTKNTKLSQAWWYAPVIMAVQ
VTEAGESFEPERQRVQ
Secondary structure LLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLEEEEEE
ELLLLLLLLHHHHLLL
PRMN -
PiMo -