NONHSAT112849

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT112849

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1866 nt

Genomic location

chr6+:42855731..42857596

Exon number

1

Exons

42855731..42857596

Genome context

Sequence
000001 CTGGTGGCTT TTGTATCGTA ACCTGAAACT GGCTTAGTAC TTTTTCCTAA AAGCTCAGGA TTTGAGAATG AGGACCCCTT 000080
000081 CGCCAGGAAA ACATGTATAC ACTCAAAATT TTGCTTGCAG TTCTAGGGTG TTTAGACCCT TCTCAGATAC CTGTGCATCT 000160
000161 TATGGGTTTT GTTTTTCTCT TTGAGACAGT CTCACCCTGT TGCCCAGGCT GGAGCGCAGT GGCATGATCT CAGCTCATTG 000240
000241 CAGCCTCCAC CTCCTGGGTT CAAGTGATTC TGCCTCAGCC CCTTGATCAG CTGGGATTAC ATGCATGTAC CACCACACCC 000320
000321 AGCTAATTCT TGTATTTTTA GTAGAGATGG AGACAGAGTT TCACCATGTA GGCCAGGCTA GTCTCAAACT CCTGACCTCA 000400
000401 AGTGATCCAC AAGCCTGGGC CTCCCAAAGT GCTGGGATTA CAGGCATGAG CAACTGCGCC CAGCTCTTGT GTACCTTATG 000480
000481 TGAGGAAGTC CTGCTCAATC AGGATCGGTC ACGCAGGCCC TGATCTTGCT ACTCTGGTTC CATGTCCTAT GGAAGACCAA 000560
000561 AGTTTACCAA GATAGATTTT TCCCTTCATA GTGGCAGATA GTGTTAACCC CTGCACCATC TGTAACTCAG AAATCCCCAC 000640
000641 CATTTCTTCC CCTGGGCTTC AGAATAGAAT TGCCTGGTTT CTCTGATGAT CAGCATGGTT CCTTAAAACC CAAATCAGCA 000720
000721 AGGAATGAAC AATTTTGTTT GGCATGGATG AAATTAGCAC TGTTTGGCTC GTTAGGCCCC AGGCAGGCAG GCACCTTAAT 000800
000801 TTTTTCCTTG CATATTCTAG TCTTCAGAAG CATTGCCTTT TGTCCTACTG GTAGTGACAT AGACCAATAA CAGGGCATCT 000880
000881 GGGGATTTTA ATCCTGAAAA CAGTGAGTCT GATACTGCTT GTGTTTTTCA TCAGTGTCCA CCCCAAGTGG GTCTTCCTGC 000960
000961 TATTCTCTTC ACTTAGTTGC CCCTCACTTG CCATCTGAGC AATTGGCAAG GATGTGCCAG GCCTAGGTTA AACTTGGAAA 001040
001041 CATGCTTGAC CATTCTATTC CCTGGTCCTT TAAGATCAGT TTGGCTGCAA TTTTGGCTCC TTGGACCCTC AAGCATAGCT 001120
001121 GGTAAATCAA GTTAGAGATG TAACTGCCTT AAAACATGCC AGCTTAGGCT GGGCACGGTG GCTCACACCT GTAATCTCAA 001200
001201 CACTTCAGGA GGCTGAGGCA GGCAGATCAC TTGAGGTCAG GAGTTCGAGA CCAGCCTGAC CAACATGGAG AAATTCTGTC 001280
001281 CCTACTGAAA ATACAAAATT AGCCGGATGT GGTGGTGCAT GCCTGTAATC CCAGCTACTT GGGAGGCTGA GGCAAGAGAA 001360
001361 TTGCTTGAAC CCAGGGAGGC AGAGGTTGCA GTGAGCCGAG ATCACACCAT TGCACTCCAC CTTGGGCAAC AAAAGCAAAA 001440
001441 CTCTGTCTCA AAAAAAAAAA AAAAAAAAGT GCCAGCGTAT GAGGTAATTA GATTGGTTCT CTCCAGAGGT AACCTGCCAA 001520
001521 GAAGAGATGC TATAGATGTT ACTCCTATAC TGTAAAACAT TGTGAAATCA GATTACTTTA AAATGATGTA TTACAAAGTT 001600
001601 ATGCAAAAAA GCAGTTGTGA CTATGGAAGC CCAAGGCTTA TATCCCAGCT CTGTCTTACA CTAAATATGG GTACAGTGTT 001680
001681 TCCACTCTGT CCATAAAATG GGAGCTAATA TTCTCCAACC TGTGTGCCTG ACATGATGGT TAAAGGGATT AAACAAAACA 001760
001761 ATAGTTTGTA ATTTATTCTG TCAGAGCAAA CTGCTGGTAA ATAAAAGGGA CTAAGTTGAC GAAAAATAAA TTTTAAAAAA 001840
001841 CCTAATAAAA CAAGTTTGTA ATTTAT
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Predicted Small Protein

Name NONHSAT112849_smProtein_92:226
Length 45
Molecular weight 4768.7442
Aromaticity 0.113636363636
Instability index 46.0522727273
Isoelectric point 5.30181884766
Runs 7
Runs residual 0.00401069518717
Runs probability 0.0768541650894
Amino acid sequence MYTLKILLAVLGCLDPSQIPVHLMGFVFLFETVSPCCPGWSAVA
Secondary structure LHHHHHHHHHHHLLLLLLLEEEELLEEEEEEELLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
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