NONHSAT108765
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT108765 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
528 nt |
Genomic location |
chr6+:31360224..31360751 |
Exon number |
1 |
Exons |
31360224..31360751 |
Genome context |
|
Sequence |
000001 CCAGTGTCTC CACTGGGAGG ATCGGGATGA AACGTTGCCT GGCAGAGCCT CAGACTTCAG AGGGAAGGGG CCTGGAGCTG 000080
000081 TGCTTTGCAG CTGCCCCTGA GTTTCCACTC CTGGTTTTTG TGCATGCGGG TGACTGTGCA GGATGACTTA GTGTCGTCAT 000160 000161 GCTTATGAGT TATTTTGAAT CTTGCTTTTC AAAACTTTAT TATCAATACA CAACTTTCTA TCATATTACA AAATCTTCTT 000240 000241 ACACACAGCT TTCACCAGCT GTAGGCTGTT TCCAAACAGA GGACCTAGCC ACTCTTCTTT TGCATGTTtt tttcattatt 000320 000321 gtaattaata tccttatacc taaagatctt tctatatatt ggattttgtt ttaaaatcac agatttctca ataaaagtta 000400 000401 ctgggtcaaa aggcatgaaa tttttttttt tttttgagac ggaatctcgc tttgtcacac aggatggagt gcagtggcga 000480 000481 gatctcagct cactgcaacc tccacctcct gggttcaaga gattctcc |
Predicted Small Protein
Name | NONHSAT108765_smProtein_158:373 |
Length | 72 |
Molecular weight | 8434.8523 |
Aromaticity | 0.211267605634 |
Instability index | 58.0311267606 |
Isoelectric point | 5.97625732422 |
Runs | 11 |
Runs residual | 0.00637509266123 |
Runs probability | 0.058968058968 |
Amino acid sequence | MLMSYFESCFSKLYYQYTTFYHITKSSYTQLSPAVGCFQTEDLATLLLHVFFIIVINILI PKDLSIYWILF |
Secondary structure | LLHHHHHHHHHHHHHHHEEEEEEELLLLEELLLLLLLLLLHHHHHHHHHHHEEEEEEEEE LLLLEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH HHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTT TTTTTTToooo |