NONHSAT107487
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT107487 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2355 nt |
Genomic location |
chr6-:4760078..4764535 |
Exon number |
7 |
Exons |
4760078..4760321,4760516..4760738,4760899..4761373,4761530..4761743,4761899..4762110,4762255..4763086,4764381..4764535 |
Genome context |
|
Sequence |
000001 AAAAAACAAA AAATGAAAAA AAACCTACAA CCAAATTTCT TTTGTGTTTG TATGATAGCT AAATCTTTCT CCAAATGTGT 000080
000081 TTTTTAAACT TTCTGGATTC TTAAGTTTTA CATGTCTCTT ACAATTAACA CTTTTATTTT TTAATCCAGT TTGATTTCTT 000160 000161 CCCTTCTGAG TTTCCAATGA ACGTATGTTA CAGCTTTTCA CTACAGTCCT ATGCGTTGTA TTATCATTTC TGATTTTTCT 000240 000241 ATTATTTTGT TTTTCTACTA CATTCTGGGT ACTTTCTCCT GATCTATCTT TTGGTTTACA AATTCTTGCT TTAATTGTGT 000320 000321 CTCATCTGCT CTTAAACCTT TTTTTTTTTT TTTTTTTTTT TTGGTACCCT TTAATCTGGA ATATCCTTTT GATTTGTTAT 000400 000401 TGAGTTTTTG TTGTTGTTGT TCTTGGTTGA AATTCTTAAT CTTGTTGGAT TTTTTTTTAA TCTCTTTGAC CTGAATAAGA 000480 000481 TCATTAGTTT GAAGTCAGTG TGCAAACTCT AACACCTGTA GCCTCTGTAG GTCTGTTTCT ATTGTCTGCT GTATCTATTG 000560 000561 ATATTAGTTC ATGTTATTTT ACTCCTTGTG TGTCTGATTA TTTTTTATTA TGTGCCAGAT ATTGGATCTA CAAAATGTAG 000640 000641 AAATATATTT GAGGTCTGAG ATGATGTTAT ATTTCTCCAG AGAGGATATG TTTGTTCCTG CCAGCTGCCT AAGTGCTCAA 000720 000721 ACACTAAAAT GTCACCTAAA ATCAATTTCA TGGCTTGAAA GAATTAAAAG CTAAGCTGTA GTCTCTAGGG GTGCTTACTT 000800 000801 CTGAATTACT CTTTTCCTTA AGGTCCTTCA GAGTTTTAAT CCAGTGTGAG AAGAGTTCAT CCACCAGGAC TCCCATCCCT 000880 000881 TGATGGAAAC TGAGCACCAA TCCCTGTCAC CTTAGATCTT TGTGGCTTTC AAAATCATAA CTCAGCATGT TGTTCTCTCC 000960 000961 GCCTTCTGGT CTTGCTCACA GGGGAAAGCA GGAAGCTCAA TCACACTTAT TTAGTCTGCC ATTACTGGAA ATCTGATTTA 001040 001041 ACCTTTATGA CAATTCTATA AAACAGATAT TATTTCCATC TTACAGAGAG GAAACAGGTT GAGAATAATG AAAGAATGGG 001120 001121 ACCAATACAA ATACAGCTTA TTTTGCTAAT TAGAGTAGGT GGTCTTTGGG TATTTGAATA CTACCACATA AGTAGTCACT 001200 001201 AGCCGGGCGT GGTGGCGGAC GCCTGTAATC TCAGCTACTC AGGAGGCTGA GGCAGGAGAA TAGATTGAAC CCGGGAGGTG 001280 001281 GAGTTTGCAG CGAGCCGAGA TTGTGCCATT GCACTCCAGC CTGGGTGACA GAGCAAGACT CAGTCTGGGG AAAAAAAAAT 001360 001361 CATGGGGAAA GTCACTCTCA CCAAAAATAT TTCTGTGATT GACCCTCTCA TGGAGTTTTT ATGAAGTGTG TACAATAGTT 001440 001441 GGGAGCAAAA ACAATTTTGC CACAGTTACT TTGAACATTT CTATAAAAGA GAGTCTTAGA GTAATATTAT AACATAGTTG 001520 001521 GAAATATAGT CAGAAGAGTG GGCTGGATCC TGGAGTTACG TAACACTTTG CATCAAATTG AGAACATGCT AAATTTCCAC 001600 001601 TACAAGGAAT AGGACAAGGA CAATAGACTT TATCTACGGG GGTTGGGATG CGGCTGGGAG TTGGGTTGGT TGAGAGAGAA 001680 001681 TCCCAGAAAA AAAAAAAAAT CCCAGAAGGC TCACTGATTT ATCTAGTTTT GTTTGTTGGT TTTCTGGCAG TTACTCTTAT 001760 001761 CTTTGACAGT TCTATCTATA TTAAGCCCAG ATTTCTCCCT TTCTACTGCA ATTGTTTTAA CCAAGTATTT TCCTTTCTTG 001840 001841 TCAGGCTTCC TCTTGGTCCT TTTATGCCAA TTTCCTCATA GCGTAGGTTC CATGATGAAC CAGTGTCTTT AGCATTCAGC 001920 001921 ACAAAGCCCA TCAACTCTCA CAGTCCTCTG AAAGCAGCAT CAACATTTAT TTATTCTTGG GCATACTTTC TACTTGGGTC 002000 002001 ATCATTTTTT TTTTTTTTTT GTATTGCTGT GCTATTCCTT GGGTATGTTT GAATGCATAA CTACTCTTTG CTTTCAAGGG 002080 002081 GGAGCTCCAA AGGGTGTCTT AAACAACAGT GACCCCAGGT TGATGGACTA GCCTTAGCAG AAAAAAACAA CAGACTTGCT 002160 002161 TTTGAGAATA GGGGTAAAAT GAAACTAATC TCTTCAAGGA AAATTACTGT AAAAGTCCTA TAATTTCTTT TGTTTTTCTT 002240 002241 TTTTCTTTCT TTCTTTTCTT TTCTTTCTTC TTCTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTG 002320 002321 AGATGGAGTT TCTCTCTTGT TGCCCAGGCT GGAGT |
Predicted Small Protein
Name | NONHSAT107487_smProtein_1115:1201 |
Length | 29 |
Molecular weight | 3283.8822 |
Aromaticity | 0.142857142857 |
Instability index | 54.7071428571 |
Isoelectric point | 6.69268798828 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0230347995054 |
Amino acid sequence | MGPIQIQLILLIRVGGLWVFEYYHISSH |
Secondary structure | LLHHHHHHHHHHHHLLLEEEEEEEELLL |
PRMN | LLLHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | i??????????????????????????? |