NONHSAT107438

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT107438

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3156 nt

Genomic location

chr6-:4491674..4499416

Exon number

17

Exons

4491674..4492333,4492447..4492561,4493033..4493323,4493430..4493541,4493621..4493716,4493812..4493933,4494051..4494083,4494705..4494779,4494994..4495062,4495144..4495228,4495336..4495439,4495525..4495776,4496045..4496342,4496431..4496481,4496615..4496793,4497049..4497132,4498887..4499416

Genome context

Sequence
000001 AACATCCTTG GCATCAAGCC TGGCAGGTGT GGTGGTCACT ACCACTGCCA TTCTGAAATA TGGTGAGACT GAAGTATTGC 000080
000081 CACTGACTTG AAAACATTTC CAAGTGAAGC ATTTAGAAAT GTTTTATTTT GTTAAAAACA GCTTTATTGA AATATAATTT 000160
000161 ACACACTATT CAATTCCCTT AAAGTATACA ATTCAATAAT TTTTGTATAA TCACAGCATT ATACAACTGT CACCACAATC 000240
000241 AATTTCAGAC AGTTTTTGGA AGCCCCCAAA GAAACCCTAT GCCCTTCAGT CATCACTCTT CAGTCCCCCA TCTCATCCCA 000320
000321 AGCCCTTGGC AACCACTCAT CTACTTTCTG TCTCTATTGA TTTGTTTTCT GCATGTTTCA TATGAACAGA ATTATTTAAT 000400
000401 ATGTGGTTCC TTGTGACTAG CTTCTGTTTT GTTTTGTTTC TTTGTTTTTA ACCACTTTAT TGAGATATGA TTGACATACA 000480
000481 AAAGCGGTAG AAATGTAGTG TATACAACCC GATGTGTTTG AAGCTCTGTG CCCCACCCCA GGCCTTTTAT TCGTGTTATT 000560
000561 TGTGTGCAGG TTGTGTATTG TGGCCAGCTG CCTTCCTGGC TGAACTGTGA GCTCAGTTTC CTTTCTCCAG TGTGATTGCT 000640
000641 TGTACAGGTT GGGACAAGTT GGTAAAACTG GAAATAACAA CTTTGCTCGC AAATGCATTG GCTAGCCTCA CTGAGGCAAT 000720
000721 TTTGATGGAA AGAGAAAGGG CAAAGCAGGT AATACCTGTT ATGCATTGTA AAATAAAACT GCTGTCAGGC TAATACAGAG 000800
000801 ACAAGAGCTT TCTTAAGTTC TGTAGAAGTA CTAGGAGTAG ATTAGGAGGC CAAGGTGGGC AGATCATGAG GTCAGGAGTT 000880
000881 CGAGACCAGC TTGACCAACA TGGTGAAACT TCGTCTCTAC TAAAAATACA AAAATTAGCC AGGCACAGTG GCACGCACCT 000960
000961 GTATTCCCAG CTACTCCAGA GGCTGAGGCA GGATAATCGC TTGAACCCGG GAGGTGGAGG TTGCAGTGAG CCAAGATTGC 001040
001041 AGCACTGCAC TCCAGCCTGG GCAACAGAGT GAGACTCTGC ACCCGGTGTG AGCCACTGCA CCCAGCCCGT ATCTTGCAAT 001120
001121 TTTCACTTAA CCATTCACAG AAAGTGCCTT TCCCCACTGT TCTTCAAGAG GCCTGTACCA GTTTACACTG GCAGCTGCAG 001200
001201 AATACGAACG TTCCAGGGTT CACAGCTGAG TTTTTGTTTA CATGGTAATA TAGAAATGGA CTGCCTGGCA TGATCTTCTC 001280
001281 ATGGCCTATT GCCCCTAGGA CTGCTCTGTG GACAGATAGG AGGAGGCAGG TCTACTTCCT GGGTCACCAA ATGCTCTGGA 001360
001361 ATCATAACCT CACCTTCTCT CCTCTAAGAC AGATAGGCTG GAGTGCAGTG GTGTGATCTC AGCTCACTGC AACCTCTGCC 001440
001441 TTCTGGGTTC AAGCGATCCT CCAGCCTCAG CCTTCCAAGT AGCTGGATTA CAAGCACAGA TGGGTTTACA GGCGTGAGCC 001520
001521 ACCGCGCCGG GCCCAGAGTT AGGGCATTCT GAAGCCCAAA ACCAGAGAAG GCTGAGGAAA TTAGCCAGGG AGTGAGAAAG 001600
001601 TCAAGCTGCT GCTTTGCATT AGATCTCAGC CTTCCCAGGA GCACTTTATT TGGATTTCGC TCTTCTTTAT TGACAGAACT 001680
001681 TTCCTTTCAT GTACGGTTGC AGTGTACCTG ATGAATCCGC TCATTTCTAT GCACACAAGG GTTTCACCTT TATAGTATAG 001760
001761 CATATTTCAT AGAAAATTAA ACATTGAACC TGAAAAATTG GATTTGGCAT TTGATATTTT AAAACTCTGA CATGGCCTTC 001840
001841 CATATTTTTT TGTTGTTTTA TTTTTAGGAA AGTCTAGAAA AGAAATGACA TTTGAAAACC ATCTACCCTG TTCACGTAGT 001920
001921 TTTGTTCCTG GATAAATCGT CTTCTGCTTT ATGGAAGTGA CTTATAAAAG AGACTCAGCA ACCAGAGTGT TTTCCTTTGA 002000
002001 AAGCCAGAGA GGAAAGTACT GCTGAGAGGT TTGTATCTGG TGCATTTGTC AGCAACAGGT AATTTCCCAG AGGTGGGATG 002080
002081 AGCAAAACCA TTGTATATTT TTAAATAGCT TAAAGAGTAT AATTGTATTG TTTGTAACTC AAAGGATAAA TACTTGAGAG 002160
002161 GATGGATACC CCATTCCCCA TGATGTGCTT ATTTCACATT GCATGCCTGT ATCAAAACAT CTCATGTACC CCATACTCAT 002240
002241 GTACCTACTA TGTACCCAGA AAAAATTTTA AAATAATTTT AAAAATTTAA AAAAAGAGGC CGGGCACAGT GGCTCACGCC 002320
002321 TGTAATCCTA GCACTTTGGG AGGCCAAGGT GGGTGGATCA CAAGGTCAGG AGATCGAGAC CCACTCCAGC CTGGCAACAG 002400
002401 AGTGAGACTC CTTCTCAAAA AAAAAAAAAA AAAAAAAGAA TGAATGCTTT AATAAAAGAA AATAACCTAA GGACAATGGA 002480
002481 TGTCAGTGCC ATGCCCGACT TCCTCCAGCT GACATGCTGA CTCTGACTCA GCTCTGCCCT TCTCTTCATG TTCTTCACTG 002560
002561 GCCATAAGTC CGAAGACATC CGGATGCTGT GGGATCCTGA ATAGCTCTTG TGTCTTAGTC CTGTCCTTCC ACCACATCTC 002640
002641 AGAAGCCATG CCAATGACAC AGCTGTGTCT GGAGGGGACG CTGTGCCTGC TGCCACCACT TGCCCTCAGC CCAGGGGTGG 002720
002721 AATCAATACT GAGGATGACA GAGGGACAGA TGGAAAGTCC TCCGTGACAC TCACTATCAA TCACATTGCA TCTGGAGCTC 002800
002801 GCCTTGTCTC TGGATTCCTG GTTACAGGGA CAATAACTGT TCTTCTGGTT AAACCAGTTG AATCAGATGT TTATAAATGG 002880
002881 CAGTCAAAAG TATGGACATG TCTAGGAAGG GCTGAAACTC TTGCAGTAAC CCAGCCAATC ATCTGTGATG TCATCTTGTC 002960
002961 TGGCAGCCTG TTAAGCCATA ATCCATCTCT TATAGCTTGA AAAGCAACAA CTGCTGGTGG CTACCAGATT TAACAAGAAA 003040
003041 GCATAGAGGA TGTCCAGTGA AATCTGAATT TCAGATAAAC AATAAATAAT TTTTACAGCA TTACCATGTC CCACATATTG 003120
003121 CATGAGACAC ACTGATATGA AAATACCACT GCTTGT
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Predicted Small Protein

Name NONHSAT107438_smProtein_278:415
Length 46
Molecular weight 5229.1018
Aromaticity 0.155555555556
Instability index 52.0311111111
Isoelectric point 6.35955810547
Runs 6
Runs residual 0.0289141414141
Runs probability 0.0286168521463
Amino acid sequence MPFSHHSSVPHLIPSPWQPLIYFLSLLICFLHVSYEQNYLICGSL
Secondary structure LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHEELLLLLEEEELLL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo oooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiii