NONHSAT107366
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107366 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1360 nt |
Genomic location |
chr6+:4256391..4258805 |
Exon number |
2 |
Exons |
4256391..4256579,4257635..4258805 |
Genome context |
|
Sequence |
000001 TACGCATTTG CTACATGTAT CTTGATGAGT TTGGATATAT GCATATGCCT GTGATGCCAT CACCACAACC AAGTTACTAG 000080
000081 ACATACCCAT CAAGATGGTT GTTCATTATT ATTCATTCTC ACCTTTTTCC ATGACAAAAC CCACATTTTT AGTTAAGCAC 000160 000161 AGAATTATCT GAAATAAAAA CTATATATTA CGCATTAATT TGTTTAATAT CTATCTTGTT CAATGGTTTG CAAGTTGCAT 000240 000241 GAAGCTTTGG ATCTTGCCTG GTCCGTTTCA TTGCTGTATC TCCAAGGCCT AGCCCCTTGC CTGGCAAAAT AACAGGAGCT 000320 000321 CAATTAAACA CACGAATGAA GTTTCTCCTT ACAGTTCTAG CACAATCTTT TTGATGTTCT GCTTAGTTTG CTCCTTGTGT 000400 000401 GAGAGGGAGA GACTTTCTGA TGCTGTTCCT GGCTTCTCAG TGTTTTCATC TAAAAAGTAA TGATGAAGAG GAGAGATCAG 000480 000481 AAGGTGGAAT TTCTACATAA TATCTATCTG GTTGGGTGAA CTGTGTCTTA CTTAATTCCT CATTCACTCA TGGAGGGCAC 000560 000561 AAGGGAACCA ATTATTTTAC AAGACTGTGG GTTCCCAAGG GTCTCTCAGA GCCTGGAGGA GTGCACGAGG CTTCTGAAGT 000640 000641 TCCCCTGAGC ATTTCTCAGG GTAAAGGCAT TCTAATAGGT ACCTGTTAGA AGACTATTTC TGATACAGAG AAAGGGCAGC 000720 000721 ATTCCAACCT TTCCCCACTG TACCTCCTCT CTGGCCTAAC CCCTCATTTT CTTACCCTAG TTCTCTGCCC CCAGTGAGAG 000800 000801 CCATTGCTCT TCCCCAACAT ACCTCAGGCA CCGCCCTCTA TGCCTCAGCT CAGGTGGTTT CTCCTCCTGG ATGTCCTCTG 000880 000881 TCCCTGCCTC TCAAACACCA TCCACTCTCA GAGCCCATGC CAAATTCCAT CCTCTCTAGG AAGTCTTCCT GGATCACCCA 000960 000961 GCAGGCACTT GTTTTTCTCC CACAATGCCT ATTGTTTCAT CTTCCTTTGA ACATCAGCAC ATTCTGTCTT GTGGTGTTAC 001040 001041 TATTATTTTT AGATGGGTAT TCAGTTTCCT GAAAGGATGC TGCCTTGGGC TTCCGTATAG CCCCTGGCTA GCTAGCAGAC 001120 001121 TGCCCTGAAC AGAGAAGACA TCACTAGATA GCAGTTGGTT GACTGATTGC AGCATCCTGC TCCTTAACTA TGCTTTCCTT 001200 001201 TCACTGAAGT GGAGAACACA CACACACACA CACACACACA CACACACACA CACACACACA CACACACACC AGCTACAACC 001280 001281 AATGCAGCCC CTGGTTTCAT ATTTTCATGA GGGGACTTTA CAACTTCTCA TCTTGAACTG TCAGGCAGAC ATTCTACAAG 001360 |
Predicted Small Protein
Name | NONHSAT107366_smProtein_839:1009 |
Length | 57 |
Molecular weight | 6321.3556 |
Aromaticity | 0.125 |
Instability index | 89.6303571429 |
Isoelectric point | 7.73040771484 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0365533600829 |
Amino acid sequence | MPQLRWFLLLDVLCPCLSNTIHSQSPCQIPSSLGSLPGSPSRHLFFSHNAYCFIFL |
Secondary structure | LLHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLEEEEEL |
PRMN | - |
PiMo | - |