NONHSAT107097
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107097 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1056 nt |
Genomic location |
chr6-:3381593..3383155 |
Exon number |
3 |
Exons |
3381593..3382449,3382556..3382626,3383028..3383155 |
Genome context |
|
Sequence |
000001 TCTGTAAACA ATGAGTGAGT TTACCATTCC ATCATTCCAT CAGTAATCAG CAGCAATGCC CTTCTTTGGC AAGAGCTCTT 000080
000081 TCCTCCCTAC ACCTTCCCTT GCTATAATAC TAGACTAGGA CTCAACAAGC GTAAGTGCAT CTTAAGGGTC AGTATGTTAT 000160 000161 GCATTGTAAA CTACGTTACA AAGCCACAAC TAAAAATACG CCTGGCTGGC TGTGCATACT GAGGACTAAG AGTTGGTGGC 000240 000241 TCAACCCTGT CACTCTGTCA AGCATGCAGA ATAGATTCTC ATGGAGAAAA TATTGACTTA TCTTTGTTGA ACTGAGAGAG 000320 000321 CAGAGCAGCA TCCTTGAAGA GCTCTAAGTA CAAGTGGAGG ATCCACCTCC ACTGAGTTAT TCCCCTTATG TTAAAGTGGA 000400 000401 CCCCCTTGTC ATCGTGACAT CAGGGTAAGT GAGGCGGAAC ATTGCAGGGA AAGAGCATGG GCCTGGGGCA GACAGATGGG 000480 000481 AATCTGGGTC ACTCATAGTC TTCTCATTCT TTAAGCAGGG TGCATGCCTG TCTCACAAAA TCATTGTGAG GGGTGTGTCT 000560 000561 TGCTCATGGT GGCAGCAAAT GAGTCTGAAA GGAGCGTGGC TGAGGGAGGC CAAGAGGATG CTGATAAGAA AAGGAACTAG 000640 000641 GGACTTTACT GTGCACTGCC AGGCATTGTT CTAGCTCTTT TCTCCTGATT CCATTCTCAC CATAAGCCTG TAAGAAATAA 000720 000721 ATTCCACTAC TGTCCCCCTC GCACAGATGG TAAATGGAGC AGAGAGAAGG CAGGGCGCTG GGCCAGGCTT GCTTGGCTGG 000800 000801 AAGGCTGTAG AGCTGGGATT GGGAGCACAG CGTGTCTGGC TGGAGAGTCC CCACTCTTCT CTGCGACATG GTTTATCACA 000880 000881 GTGGCTGTGC TGATATTTTA AGCCTGGCTG TTGTTAATTT TTATTGGGGA CTGGTCCTGA AACGCCTCAC CACTGAGGCT 000960 000961 ACTCAGTCAG CCCCATTCTG CTGTCCTGTA GTTAGTTGAT CCTGCCCAAC CTATGGCAGA ATAGACAAAA GGTGTCCTAG 001040 001041 GGAAAGGTCC CCAAAA |
Predicted Small Protein
Name | NONHSAT107097_smProtein_746:892 |
Length | 49 |
Molecular weight | 5209.9252 |
Aromaticity | 0.0625 |
Instability index | 52.06875 |
Isoelectric point | 9.48992919922 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0487924899689 |
Amino acid sequence | MVNGAERRQGAGPGLLGWKAVELGLGAQRVWLESPHSSLRHGLSQWLC |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHLLLLEEEEEELLLLHHHLLLLLLLL |
PRMN | - |
PiMo | - |