NONHSAT106610
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT106610 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
490 nt |
Genomic location |
chr6-:2167900..2168389 |
Exon number |
1 |
Exons |
2167900..2168389 |
Genome context |
|
Sequence |
000001 ATGTAGAAAC AATAAAGATG GAAGGGGCAC CCTTAGAGAA GTTTGTACCT CCTCAGTGTA GGGGCATGAA ATGACACCCA 000080
000081 CAAAGAAGAG CCATGGTATT GTCTTGCTTT CTGCCTCAGT ATTGGCTAAC TTTCACTTTA AAGGAATTTT TAAAATTGGT 000160 000161 AGGACATAAT AAATGCTTCA ATGAAGGCAC CTTAGTCATC CAGCCATTTG TTCGCTTATT TAAGCAGTAC TTATTGACTG 000240 000241 CCTGCTGTGT GAATCCGGTT GTTTCACTAG GCATTGAAGG TACAAGAGGA ATGTTGTTCC CATGGAATTA ATACCAGTAT 000320 000321 ATATATACGA TTTAGTGGAG TGGGATGTTG CCGAAATGGA AGTCTGTGTA ACTTGTGATG GGAGCAAGGA GGTAAGAGCA 000400 000401 GCCAGAGGAA TTATCAGAGG AGGATTGGCT TGGGCTGGGT TTTTTTCAGG CAGGCTAGCT GGGGGCAGGC ATTTTAGGAA 000480 000481 GAAGCTGCAT |
Predicted Small Protein
Name | NONHSAT106610_smProtein_92:310 |
Length | 73 |
Molecular weight | 8314.8943 |
Aromaticity | 0.152777777778 |
Instability index | 40.7444444444 |
Isoelectric point | 8.83685302734 |
Runs | 13 |
Runs residual | 0.0396390916464 |
Runs probability | 0.0468115173998 |
Amino acid sequence | MVLSCFLPQYWLTFTLKEFLKLVGHNKCFNEGTLVIQPFVRLFKQYLLTACCVNPVVSLG IEGTRGMLFPWN |
Secondary structure | LEEEEELLLHHHHHHHHHHHHHLLLLLLLLLLEEEEEHHHHHHHHHHHHHEELLLEEEEL LLLLEEEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL LLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooo oooooooooooo |