NONHSAT106315

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT106315

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1577 nt

Genomic location

chr6-:997480..1131273

Exon number

3

Exons

997480..998707,1005633..1005763,1131056..1131273

Genome context

Sequence
000001 GTCAGGTTTT TCTCTGTTTA AGTGGCTACA GCTGAATAGC TCAGGCCAAA CTTAAAGCTC ACACTTGAGA CTTGACGTGC 000080
000081 TCAGCTCCTG CTAAAGAGGC TCCAGGGCAG CGCCTGCCTT TCCGGGAAGC TCCCCTGAGG GTCACCGAGG CTGCAGAGAA 000160
000161 CACCCGGTGA TGACTGCATG GATCTCCTTC ATCTGCTGGG ATTCAAGCTG TGTTGCTGGC CCTGCATGTT TTTCTTCGGG 000240
000241 AAGGCTGTGC AGTCTGCTCT GAGGAGACAG ATCAACCTAG CCCTTCTCCA GGACGAACTC CGAAAACCAC AGGAATTCAC 000320
000321 GTTCAAAGGA TGACGCATCT CAGAATCAGG TGGCCTTTAG TGAGCCAGTG GCTCGGATTT ATGTGGTCAG ATTCTGAGCC 000400
000401 GGCAGACACA AGGACAAGCC AGCGAGAGGT GTGGCAGGAC TGGAGATTCT GTGTAGGTCT GTATGTGATG GGCTTTATGA 000480
000481 AATGCATCTA TTTAATGTAC TCCAAGCCAA TTCTAAATGA AGCATGATGC AGCCAAATAT GAAAGGAGCT CATTATTGAT 000560
000561 ACATTttatg gaccgaattg tgttctctgg aaaaggtagt tgaagtccct taatatgtga ccttatttgg aggaatagga 000640
000641 tcttaaagaa gtaatcaagt taaaatcacg tcattcaagt gggctctaat ccaatataac tgatgtcttt attagaaggt 000720
000721 taaatttgaa cagagacaga tgtgcataga gagaaggttg tgtgaagaga cacaggaagg agacggccat ctatttggaa 000800
000801 cagagcttcc cttatagacc tcagaaggaa ccaactctga taccttggtt ttgggcttcc agactccaga actgtgagac 000880
000881 aataaattcc tgttatttaa ggctcaccag tctgcggggc tttgccatgg catcctaaga aaGTGAGCGT GAAACTTAAT 000960
000961 TCATCAGTAC GGAAAACATC TTGGCAGTTT AACCACTATT GTAATACTCA TGTATTGATA CGTGTTTCAG AATTTTTCTG 001040
001041 CTCTCTTCCT CAGTATGTAT GTACAGCAAA AGCTTCAGAG AGAAACTCCA GGCCATGCAA ACTCATGAAC TAAACTCTGG 001120
001121 GAGAGGTGCT GGTGATGACC TGGAAGGGAA AGATGAGTGT TTGGCACAGG ACGGGACCGA CCGAAAGTGG TTGTGTGGGA 001200
001201 GGGTTTGATG GGGTGGCTGC TGGTTGTTGT TGGGAGAGGA GGGGCAGGTG GGTTCTCTCC TCTGGCAAGG CCACGGGTGT 001280
001281 GGTCTGGCTT GGAGCAGGAT CCAGAGCCAT TGAACTCTGA GGAACTATGA AGCTCCTGCT GCAGGTAGGA AAGAAAGAGA 001360
001361 AGGTGAGAAG ATAGGAGGAA GCTTCCCAAT GCCCTAGACA GGTTGCAGGT GAGGGCACAG ACCCCTGTGC AGATGTGCTG 001440
001441 GAGCTGCAGT GCAGTGGGAT GCCCGGGAAC ATGGGGGGCT CCTGACTTAG TGCTGAGATG CCTGGAAGTC AAAGGCACGT 001520
001521 GGAGATGGCG AGCTGCACGA TGAGAAGTGT GATCTCCTCC TTCCAAACTG cagagag
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Predicted Small Protein

Name NONHSAT106315_smProtein_329:526
Length 66
Molecular weight 7906.1743
Aromaticity 0.169230769231
Instability index 43.18
Isoelectric point 7.80511474609
Runs 10
Runs residual 0.00355769230769
Runs probability 0.0375552022612
Amino acid sequence MTHLRIRWPLVSQWLGFMWSDSEPADTRTSQREVWQDWRFCVGLYVMGFMKCIYLMYSKP
ILNEA
Secondary structure LLEEEEELLHHHHHHLLEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHEEEELLL
LLLLL
PRMN -
PiMo -