NONHSAT105972

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT105972

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2785 nt

Genomic location

chr6-:168171..172220

Exon number

2

Exons

168171..170561,171827..172220

Genome context

Sequence
000001 CTTTTAACAG CACCCAAGTC ACCTCTTGAA TGCTTTGCTG CTTAGAAATT TCTTCCACTA AATACCCTAA GTCATCTCCC 000080
000081 TCAAGTTCAA AGTTCTACAT ATCTCTAGGG CAGGGGCGAA ATGCCACCAC TCTCTTTGCT AAAACATAGC AAGAATCACT 000160
000161 TTTACAGTAG TTCCCAATGA GTTCCTCATC TCTATCTGAG ACCATCTCAG CCTGAATTTT ATTGTCCATA TCATTATCAG 000240
000241 CAGTTTGGTC AAAGGCATTC AACAAGTCCC TAGGAAGTTC CAAACTTTCC CACATTTTTC TGTCTTCTTC TGAGCCCTCC 000320
000321 AAACTGTCTC AACTGCTGCC TATTACCCAG TTCCACATTT TTGGGTATCT TTACGGCAGC ACACCACCCT ACTGGTTATT 000400
000401 CAACAGGAGT TATTATCTAT GAAAGAAGTA CAACAGAAAT GTAAAAAACT TGAGGAGGTT AACAAAATTT TGGAACAAGA 000480
000481 AGTAGTGAAT CTTAAGACAC ATGAAAAAAA TATGGTAGAA TTTGGTGACG TAGAAGAATG TAAATTGCAG TTGGAAGAAA 000560
000561 GAGCAGGACA GGAAATAGAA AAATTAGAAG AAATCAATTT ACAGGTTAGT TTTTTTAATC AGGTAGGTTT ATCTGTAATG 000640
000641 TGCTTTCATT TATTTCACTG CAAATTATAA TATAGACATA CAGTGTTTTG TCTGCCTCTC TTATAGGAAT TTGCTTTGTA 000720
000721 GAGTTTTAGA AAAAAAGGTG GCACCTGTTT CTTATTTTAA ATATTTAAAT TTCCATCATG ATTATAACTA AGTTGATCTT 000800
000801 TCAGAGTAGT GAGTTTCACT ATACAGTCAT TTGGTTATTA AAACCAGTTA GCATAAGACT ATTAGAAAAA GAAAACTCTG 000880
000881 ATTTAAAATT ATATGGTACT TTTGAATTGG TCTTACGCTA CATTGTTCAG TTTTTAACAT TTCCAATGGA TTCTATTATT 000960
000961 TTTAAATGAT TAGATTACAT GAACACTAAC AAGAATGATT TCAAATTTTT ATAATTCATA TTTAATTCTG AATTCTGTTA 001040
001041 TCAATTTAGA TGAAATTGCT AATAGATGTT TTAAACTTCA GCCCCTTTTT AAAACACATA TTTAAAATTG CTTTCTGAAT 001120
001121 CACTGACTCA AAATGAAAGG CAACAAATAG AGACTAATTA GGTTATAATT GTTTTAAAAG TATGATTTTT TATTTGTTTT 001200
001201 AGAAACAAGC AGAATATGAA AAACACAGCA GTTAAAAGAG AATAATATGG CTTTGATGAA TAAAAGAGAA CTCTGACTGA 001280
001281 AAGACGTGGA ATGTCAATTC TCCAAAATGA AAACCGCTTA TGAAGAGCTT ACTACGGAAT TAGAAGAATA TAAGGAAGTC 001360
001361 TTTGCAATAA CATTAAAAGC TAACAAATCC ATGTCAAAAA ATTTAAAGAA ATAAGTCAAA ACATACACTT GTAGAAAATC 001440
001441 AATCAAGTTC ATTAATTTGC CATGAAAGCA TAATTTTTAG TGAGACAACT TCATGAGATT AGTAGGAAGT GAAAGCTATC 001520
001521 CTGATAGTAT AATTTTTGAA AATAATGCTA GTAAATAAAC TTACATTTAA AATGTTAGTC AAGGACAGTT TCTGTCTCTT 001600
001601 CCCTCATTTT TTTTTTAACT TTTGTATGGC CTTTTCCCCT GAAAAATCTT ACGTAGTTAA CCTAGTCTAT TAGTCTTTTA 001680
001681 GCATTTTTGA AGCTTTATGG TCAATAAAGT GATCTTGCTG TAAAATTACT TTTCAGAATT CTTCTAAATG GAAATATTAA 001760
001761 TGAATTTAAT TTGTTTTTTA GTAGGTCACA ATCTAAACTC AAAGTGCCCA AACTACTACT ATTCTGGGCA CGTCCTGGCA 001840
001841 TTTAGTAACT TAACTTTCCT GATTGTGATT TTTAGTATTA TCACTAGAGG GCGCTTTGAG ACAAACTTTT CTGTATAGTT 001920
001921 TTTTCAGTCT ACAGGAAGAC ATGCTTGTGA AATAGGGAAT GATTATCCTA GGGATGAAAG AAAGTGTAAT TTACAAAGTT 002000
002001 GTTTAAAAAT AACACCTTGG TCAGCCTGAA GGGGTGTGTG GAAGACAGAA AGGGCAAGCC CCACCTCCAG TGCCTTGGTC 002080
002081 ACAATGCTAA GGGCTGATTG CCTTCAGAGA TGCTTTAGTT CTTTTTGATC ACCAATCCAA CCATCTAGTT CTCTCCTAGG 002160
002161 AGTTCTTGCT CTGAATTATT TCTCAGTGTG AAATGCTTAT TTTTTCCTAG ATAATGGGTG AAATGTACAA GGGTGGTGAA 002240
002241 AACAAATGTT TGAAAATATA TTTAGGAGTG ATTTCTAAAA TCCTGAAACT GGTTTCTAAA TACAAGTATT TCTAGCTTCT 002320
002321 GTTTTTGTTT GTTTTTGTTT TTGTTTTAGT TTTCTTAATT GTATATTATT TAAGGCATAC AACACGTTAC TATATGTTTA 002400
002401 TTCATAGTGA AGTTGTTCTT ATAGTCAAGC AAATTAACAT ATCATCTCAC ATAGTTACCT TTAAATACAA GTATTTCTTT 002480
002481 TTTTTTTTTT AATTTTCCCG AGATGGAGTC TTGCTTTGTT GCCCAGGCTG GCGTGCAGTG GCGCAATCTC AGCTCACTGC 002560
002561 AACCTCCGCC TCCCAGGTTC AAGCAATTCT TCTGCCTCAG CCTCCCAAGT AGCTAGGATT ACAGGCGCCC ACCACTGCAC 002640
002641 CTGGCTAATT TTTGTATTTT TAGTAGAGGC AGGTTCTCAC CATGTTGGCC AGGCTGGTCT CGAACTCCTG ACCCGGTGAT 002720
002721 CTGCCCGCCT CAGCCTCCCA AAGTGCTGGG ATTACAGATA TGAGCCACTG TGCCCAGCCT GAATA
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Predicted Small Protein

Name NONHSAT105972_smProtein_1544:1672
Length 43
Molecular weight 5047.0507
Aromaticity 0.238095238095
Instability index 51.0285714286
Isoelectric point 8.73883056641
Runs 10
Runs residual 0.0619349005425
Runs probability 0.0403550609434
Amino acid sequence MLVNKLTFKMLVKDSFCLFPHFFFNFCMAFSPEKSYVVNLVY
Secondary structure LLLLHHHHHEEELLLLLLLLHHHHLLEEEELLLLLEEEEEEL
PRMN LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL
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