NONHSAT105650

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT105650

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1907 nt

Genomic location

chr5+:179289110..179291133

Exon number

2

Exons

179289110..179289402,179289520..179291133

Genome context

Sequence
000001 gtcaatctct taaggtgcct aattcataaa cttaatcaca ggtatgtatg cataggaaaa aacagtatgt ataaggtttg 000080
000081 ttattatctg tggttttaga catccactgg gggtctggtt ttagatatcc actgtatccc ctgtggataa gggggtaact 000160
000161 gctgTATCTT TTAGTAGAAG CAAGAGCAGC CCCATGTGGG GGCTAACACT GGACACTGGT CAGTTTCAGC TCCTCATGCA 000240
000241 AAGTGAGGGT ATCCTTGTGG CTCCAGCCCT GGGGCCCCCT GCGGTCACCT TTGGGCATCC CCTGATGCAG GTTGGTCAGG 000320
000321 ACCTGCCCAG CTTGCACCAG CAGGTTCTGC GTCTCCATCT GACCTGGCAG ACCTTGCACT CTTCCACCCA CTGTGGAGGA 000400
000401 CTAAGTGTCT TGAACTTCCA GAACACAGCC AGGGCCCCAT ACTTGGCCTG GGGAGAAGTT GGGAGGCCTA AGCAGTGGTT 000480
000481 GGGGGCCACA GCAAGGCATT GCACACAGTG GTTTTTATTT CTTTCAGGGA TTTATTAAGG CATTGAGCAC AGTGTAATTT 000560
000561 CTAGCCAAGT GAAATGAATC CAAGGAAATA TATCAGGACC TGAGGGATGT TTTTTTAAAG TTACTGGAAA GGATGATGAG 000640
000641 CTGAGAGCAC GTGTACAGCC ACGCCTGTGC GCAGCGCCCA CTCTGTGCAA TAAACATGTT CTGCCCATGT TCCTCAGTCA 000720
000721 GGAGGTTCAG GCTCCCGGAG AGCACCTGAG GGTTCCATCA CTTTGGTGCC CAACAAGCAC ATGCCCCCCA ACCTGGTGCC 000800
000801 AAGAGGCAGG AATGACCCCC ATACCACATA GCTGCAGGAA AGCATCCACG GATGGAGGGA CTCAGCTGGC CTGGCCGCAG 000880
000881 TGTGGAGCAC AGAGGTATGA GGCAAGCAAG GGCAGATCTG AGAGCCTGTA ATGCTAGGCA GGTGCAGCTG GTGCGAGGCG 000960
000961 GGCTCCCACC AGGTGTAAGG AAGGTGGGAG CCACAGCCTC TTCCTGGGCC CAGAAGCAGC CGGCGCCAGG AGATGCAGGC 001040
001041 CCAGGGAATC TGTCTAAGGC AGCTGGGTCT GCACCAGCCT TCTTTCCACT CACAACTCAC TGCTCCTGGG AGAGCAGGAG 001120
001121 GGGCACACCT TTAAAGAGAA ACTGATAAGG GAGGAAAGGC AGGAGGAGAT GAGGCCAGCC CCACTGATGA CACCTTGGGC 001200
001201 CAGGCCTCAC AGCTGCAGGC ATCAGCCGGA AACTCCAGGC TGCTCATGGT CACTGGCGGT GCTGAACTGT CTCTCCACTT 001280
001281 TCTTTTGGTC CTTGATCTTG AGTCCAATGT CCACTCTCTT CTCAAAGAAG TTCACCAGCA CGGACTCCGT CAGGATGGAG 001360
001361 GCCAGGATCT GCTCAAAGGA GATGCACCAG TCGGTGTCGA CGGTGCCGCC GATGCGCGCT GTGGGGCTGC AGGCCTCCCC 001440
001441 GCCCACCAGC ACCGTGTCGT CTGCAAGGTC TTCACATTGC AGGGAGCCCG TGCTGACCAC CGAGTAGGAG GACATGGACA 001520
001521 TGTCGTCTTT GGTTTCATCG TCAGACAGCA GCTGGGAGGG TGAGCCCTGT CCCTCGCCGC TGCCCCCCTC CACCACCACC 001600
001601 TGGCTCTCCT GTGGGGCTTT TCCGAGGTGT GTGTCTCCGC CTGCTTTGGC TTGGGGGTCT CCTGCAGCTG GGGGCTGAAG 001680
001681 CTCCCTGGCT GCGTCCTGAT GCAGTTCGGG TGCTGGTGGC TCGTCCTCCT CAGTGGCACA GTCCCTGGGC TTCCTGCCTG 001760
001761 TGCGGGCTGA GAACTTCTTC CCCACCTCTC CGATGCGGAG CAGGAGGCTG GCCACGGTGG CGATGGCGTG GTACAGGTCC 001840
001841 TGCTCCATGG GGTCTTCACT GAACATGTTG TAAAGCGTCT TGCACAGCTC AATGAACTGC TCCTTTT
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Predicted Small Protein

Name NONHSAT105650_smProtein_851:1144
Length 98
Molecular weight 10316.6088
Aromaticity 0.0515463917526
Instability index 48.3680412371
Isoelectric point 11.594543457
Runs 13
Runs residual 0.00248186330661
Runs probability 0.0300640006522
Amino acid sequence MEGLSWPGRSVEHRGMRQARADLRACNARQVQLVRGGLPPGVRKVGATASSWAQKQPAPG
DAGPGNLSKAAGSAPAFFPLTTHCSWESRRGTPLKRN
Secondary structure LLLLLLLLLLLLLLHHHHHHHHHHHHLLLEEEEEELLLLLLLEEELLEELHHHHLLLLLL
LLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -