NONHSAT105456

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT105456

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1571 nt

Genomic location

chr5-:177139134..177145570

Exon number

5

Exons

177139134..177140171,177140749..177140917,177141070..177141178,177144164..177144297,177145450..177145570

Genome context

Sequence
000001 ATTTAGAGGT TTATTTCGAA CAACTGGCAA TTCCAGGAAT GATGGAATAA AGCATACGAA GTAGAAGGAC TGGAACCTCC 000080
000081 AGAAAAAGTA CTTTAAGTTA CCTACAGGTG ATCCTAGTCA GGCAAATGAA AACAGTAGCC TAAAGTGTCA GTTTCAACCC 000160
000161 GAAAATAACA GCTCTGATTT CTCATGGCTC ACACTCGTCT GAAATGACTC GGGTAGAGGC TGAGGAAGGC TGTGTTGTTT 000240
000241 GTCTACCTGG GACTAGTAAA AAGAGAAGAG AAAGACATTC TTGATTTTGG TGACTAGAGT TGTAGATGCT GGAAGCTTTG 000320
000321 CCACTAACAT TGATGAACCA GATGCATGTC ACCAGCCCAT CACGGGCACC ATGGGCCGGC ACTGCCACGT TTTCCAAGGA 000400
000401 ACCTGCCAGA GCTCCTGCGG AAGCTGCTCC TCGGGCGATG GAGTCCCTTT GCTGCTAGGC CCTTCTTCAG TCACCACAGG 000480
000481 ATGCCTGCCA TTCATGAACA GGAAGGAGAG GACGGGCTTT GAATAAAAAA CAGGATCCAG GAAATATTTG TGAGGCCATT 000560
000561 TGGACTTCAG TGTGAAATGG TGTTAAAAGA TGAAGTCATT TATTCAAGAA GTAAACCTCT GCCACCTGGA CTGTGCTCAG 000640
000641 ACATTTCATT GATTTTGTTT AATAAACATT TTCTGGCTTT GGGAGGTGTC TCTCTTGGTA GAGCACAGTG TCAAAGATGG 000720
000721 ACAAGATGGA CACATAGTCC ATTATTTGGT ATTGTTTGTG TATGGGAGCG GACCACAAAT TAATGTTTGG AGAACAATTT 000800
000801 TGTCATAACA CACTGTTGAG GCTCAGTTGT ACAGAACTGG AAAAGTCTTT CAGCTTGGCA CATGTCCTGA TTCAGCCTTT 000880
000881 GTTTAACATA CATTCCAATC CGGATTCTAT CTTCACTGGC TACAAAGACC ACCTGATACG TGCACCACGA CACAGGAGCT 000960
000961 GCTGGAGAGG GGGTAGTGTT ATCACCTCAA ACCCACAGCC ATATttttca aaagccagct tagagagagg tgtactgata 001040
001041 gctgcataga gaacatgcag tccatccatt cttcCCAGTG ATGTACATTT CTCAATCAGT AACCACGTGG TATACCAGCC 001120
001121 TTGAGTGTCA CATCTCCCAA CCATACCAAA TGGATCACCT AACTGGAGGT GGGGGGGGCC CCTCAGAAAT GAGATTTCGT 001200
001201 ATTTACTGTA AAATTGCCTT Attttttctt ttgaggtgga gtctcactct gttgcctggg ctggagtgca atggtgtgat 001280
001281 cactgctcac tgcaacctcc gcctcctggg ttcaagcagt tctcctgcct cagcctccca agtagctgca attacaggcg 001360
001361 catgccacca ctcccagcaa atttttatat ttttagtgga gacagggttt caccatgttg gccaggctgg tctcaaactc 001440
001441 ctgacctcag gtgatctgcc caccttggcc tcccaaagtt ctgggattaa aggtacgagc caccgcaact ggcTgagaat 001520
001521 ctttttattt gctgatttgt ctcttgtgta ttttctttgt tcagatgtct c
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Predicted Small Protein

Name NONHSAT105456_smProtein_761:1048
Length 96
Molecular weight 10711.2025
Aromaticity 0.0947368421053
Instability index 49.3694736842
Isoelectric point 8.98773193359
Runs 17
Runs residual 0.0498963945296
Runs probability 0.0373920633437
Amino acid sequence MGADHKLMFGEQFCHNTLLRLSCTELEKSFSLAHVLIQPLFNIHSNPDSIFTGYKDHLIR
APRHRSCWRGGSVITSNPQPYFSKASLERGVLIAA
Secondary structure LLLLLLEELLHHHHHHHHHHHLLHHHHHLLLHHHHHHHHHHHLLLLLLLLLLLLLHHHHL
LLLLLLLLLLLEEEELLLLLLLLLLHHHLLLEEEL
PRMN -
PiMo -