NONHSAT105067
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105067 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1337 nt |
Genomic location |
chr5+:170323933..170331465 |
Exon number |
2 |
Exons |
170323933..170324351,170330548..170331465 |
Genome context |
|
Sequence |
000001 ATGACCCAGT TGGTGGTCAT ACTGGTTGGC CAGTGCGAAA ACCAGATTGG CTGCTGCTTC TGGGACCTGG CACTAAGGGA 000080
000081 GCACGCCGCG GTCAGCCAGA AAGGAATCTA TTATGAGGCA ATAAGCAGCT TCCTTAGAAA TGTGGATACC AGCTGTCTTG 000160 000161 ATTGACATGG TAGAAGGGAT AGTGAATGAA ATTCTGCAGG GACCACTGAG AGATGTATTT GATACCAAAC AGCTCATCAC 000240 000241 TGATACTTAT GGCTCCGGAA ATAATTGGGC TGTGGATCAC AAAGTTTTTG GCAGTCTGTA TCAAGACCAG GTTTTAGAGA 000320 000321 AACTCAGAAA GTTGGCAGAG CACTGTGATT GCTTGCAGTG TTTCTTTATA ATACATTCCG TGGGAGGAGA ATCAGGATCT 000400 000401 GGGCTTGGCA CATttcttcA AGGTGCTTGA AGATGAATTC CCAGAAGTAT GTAGATTTAT GACCTCCATT TATCCTTCCG 000480 000481 GTGAGGAGGA TGTCATAACT TGACCTCATA ATGGCATCTT GGCAATGAAG GAACTTAATG AGCAAGCAGA CTGTGTGTTG 000560 000561 CCCATTGACA GTCTTTATTT GACATCATTA GCAAAGTCGA CCTCATAGTG AATTCTGGAA AGTTGGGTAC AACTGTAGAC 000640 000641 GACTTCAAGT GCTGTGGCTT TAAAAAGCAG AATAAGCCCT TTGTTGCAGT CAACAACATT GTGGCAAATT TGCTCAACCT 000720 000721 AACAAGCTCC GCAAGATTTG AAGGGTCCCT TAATAAGGAC CATAATGAAA TCAGCATGAA TTTAGTTCCT TTTCCTCAGC 000800 000801 TTCATTATCT TGTATCAAGC CTAACACCTC TATACACACT GGCGGATGTT AACATTCCTA CTAAAAGATT GGATCAGATG 000880 000881 TTTTCAAATG CCTTTAGTAA AGATCACCAG CTGCTTCAGG CAGACCCTAA ACATAGTCTT TACCTCACCT GTGTGCTCAT 000960 000961 GGTTAGAGGA AATGTACAGA TTTTACATCT TTGCAGAAAT ATTGAAAGAT TAAAACCATC TCTACAATTT GTCTCCTGAA 001040 001041 ATCAAGAAGG CTAGACCAGC CTGTCCCTCC TGTGGACCAT TTTTATTCAT TATTAGCTTT AGCAAATAAC ACATATGTGA 001120 001121 AGCCCACATT CATGGAAATG AAAGAGAGAT TCATGAGGCT CTACAAGAAA AAAGCTCACC TTCATCACTG TCTACAAGTT 001200 001201 GAAGGCATGG AAGAAAGCTA TTTCACAGAA GCTGTGTTGT TTTTATCAGC ACTCATACAG GAGTGGCCAC CACTGTATGA 001280 001281 GTGGATGCCA GAAAAAACAT ACCTGTGCAA GATTTACCAA GCCTAAGCAT AGCCGTG |
Predicted Small Protein
Name | NONHSAT105067_smProtein_845:1012 |
Length | 56 |
Molecular weight | 6730.0328 |
Aromaticity | 0.181818181818 |
Instability index | 64.5947272727 |
Isoelectric point | 7.70135498047 |
Runs | 9 |
Runs residual | 0.0121212121212 |
Runs probability | 0.0369388996841 |
Amino acid sequence | MLTFLLKDWIRCFQMPLVKITSCFRQTLNIVFTSPVCSWLEEMYRFYIFAEILKD |
Secondary structure | LLHHHHHHHHHHHLLLLLHHHHHHHHLLLEEELLLLHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |