NONHSAT104958

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT104958

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

483 nt

Genomic location

chr5+:165332131..165332613

Exon number

1

Exons

165332131..165332613

Genome context

Sequence
000001 ATGACAAACA ATGGAAAAGA GGAGTGGCAC CTGGTGTATA TATATTTCCT TGGCCTTTTA GAAAACATGG AGTTGTTCCT 000080
000081 TTGGCCATGT ACATGCGAAT ATACAAGAAG GGTGATATTA TAGACATCAG GGGAATGGTA ATGGGTACTG CTCAAAAAGG 000160
000161 AATGCCCCAC AAATGTTACC ATGGCAAAAC TGTGTCTGCA GCATTACCCA GCATGTCACG GGCATTGTTG TAAACAAGCA 000240
000241 AGTTAAGGGC AAGGTTCCTG CCAAGAGAAG TAATGTGCAT ATTGAGCATG TTAGGCACTC TAGGAGCCAA GATAGCTTCC 000320
000321 TGAAACCCAT GAAGGAAAAT GATCAGAAAA GGAAGCCAAA GAGAAAGGTA GCTGGGTTTA ATGGAAAGAC CAGCCTGCTC 000400
000401 CACCCAGAGA AGCACACCTT GTGGGAAGCA ATGGAAAGGA GCCAGAGATG CTGAAACCTA TTCCCTATGA ATTCATAGCA 000480
000481 TAA
[back to top]

Predicted Small Protein

Name NONHSAT104958_smProtein_86:232
Length 49
Molecular weight 5357.4584
Aromaticity 0.0625
Instability index 49.1541666667
Isoelectric point 10.012878418
Runs 9
Runs residual 0.0219298245614
Runs probability 0.0290780977055
Amino acid sequence MYMRIYKKGDIIDIRGMVMGTAQKGMPHKCYHGKTVSAALPSMSRALL
Secondary structure LEEEEEELLLEEEELLHHHHHHLLLLLLLLLLLLLHHHHHHHHHHLLL
PRMN -
PiMo -