NONHSAT104639

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT104639

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4595 nt

Genomic location

chr5+:151186316..151190911

Exon number

1

Exons

151186316..151190911

Genome context

Sequence
000001 ATTAGCTACT GAGCTTAGAA CTCTTGACCC ATGAGATTTT TTTTTTAAAT TTTTATTTTT ATAGAGGCAG GGTCTTGCTA 000080
000081 TGTTGTCAGG CTGGTCTCAA GCTCCTGGCC TCATCAGTTC TCCTGCCTTC CAAGTAGCCG GAACTACAGG TGTGCACCAT 000160
000161 TGCACCTGGC CTCATGAGTA TTTTAGTTAG ATAAGATTTG TTTGGTTCAG TGGGTCTTAG TTTTTTAAGA CCTGTTAATT 000240
000241 TGTAATTAGA CATCTTGGGC CTTAAACTGT ATTTTTGTTT TAGTGGTGAG GTTGGGTTTT ACTTTGTGTA TTCCAGCGTT 000320
000321 CTCAACTTTG TCAGATATTG CTAGGGACCA GTGAGATAGA TAATCCAAAA ATAATAATTT GACTTTGGTT GAGTATGTCA 000400
000401 TTACCACAGT GTTAGTTGAA TTGCACTTTA GGTTAGAAAA GTTAATTTTC ACATCTGTGC TGCGGGTTAG GTGATATTGT 000480
000481 CCTCAGCACA ATAGATGAGG AAGAAACTGA ATCAGAACAG TTAAATGACA GGCTTCCAAG TCATCCATGT AGCAAGGAGC 000560
000561 ACATTTGCCT CCCAAACTGA TGCTTTTTCT CTAGAACCAT AATGCCCCCC TAATTACATT TCAGTAGCAT AGACCGCAAT 000640
000641 GAACTTCCTA CTGTAGGGAG ACTTGAGTCT GGAATACATT CAGAACAAGG TTAACATTAC AGTTCTTAAT TTCCTTTAGG 000720
000721 GCAAACAAGA TAATTAAACT TGGGTTTTGT GAGTCTTTTT TTGATTTGCA GATTATATAT GGTAACACAA TAATGGTGGT 000800
000801 TTGTTTTTAA GTTTTTTTCT CATCAGGTTT GATAATTTAA TGCAAACTTC AAATCTGGAT GTGAATAATA ATATTTTTAT 000880
000881 TATAGTATAA TCCAGGTGAG TTTATAGAAT TTGTGTTTTG TGCTTATAAA CTGTCACCTT CTGATACTTT TCTTCATCCC 000960
000961 TCTATTTGAA AAACCCTTGT AGAATTTAAC GATTTAATGG AAAATGTTGC ACTTTATAGA AGGCCATTTT AGAACTTACA 001040
001041 GGTAACCTTT TTGAAGAGCT TAGATTTGTA GACCACTGTT TATGCTGAGT GACATTTCTT TTAAATGGTT GCATTTGTCA 001120
001121 AATCTATAAA GATGTTTTTT ATATTGCAGT TTTCTTTTTG TGCTACTTAA AGGAATCTTT GCAATGCTGC ATATAGATAA 001200
001201 TTGTTGACCT TTTTAGTTCA GCAGTTTTTA AACTTGAAGT AACATCAGCA TTTATTTGAA TATTAGGTTT TAGCTAACTG 001280
001281 CCTAATGTAC CAAAAAAAAA TTAGCAATGT CTTATGTGGG ATGAGGGGTT AAGTTAAAGT TGCTGATCAA GTAATGGCCG 001360
001361 TGTGGCACAA GATGATAACT AAGAATTTCT GGTTCTAAGG TAGTAATGCC TTTTGGGATT TATATTTGTT TAATGTTGAG 001440
001441 ATTCTGGGGA CCATAGGTGG GCTTGTCAAC TCTTAACAGA CTATAGTAAA GGAGAGATGG TGGCACATGT GAGATAAAAC 001520
001521 TTGTTTATAT TTACATTCTT ATTAGTGGAT AGATATCACC TCAGTACAAC ACTGAAATTA AACTGCCTTG TTCATGCTTT 001600
001601 CATGTCTCAA ATCAAGGCCT AAATGAGTAA AAAGATGATT ACAGATTACC TAAAACCCTT AACCAGTTTT GGTTTTTGAT 001680
001681 TATGCATATG TGTTGGCTTG CAATTAGGTT TTTAGTTTCT GTTTATGTGA CTTGTTTGAA AACATTGGAT TCGTCTTCTC 001760
001761 TCCACAGTTT CTACTTGAAC CTAGTAGCTT ATTTTAATTC CCTGTAAGAG GAAAATAATA TAGGGAATCT GTTCAACTAT 001840
001841 TCCTTTAATA AATCATGTGA CTTGGCCAAT TACAGAAATT CCTAAGTGTA GTATTTTGAA ATGTGGCCAG TGTCCCAGAT 001920
001921 TTGTAAGGTA CAGTGTGCAT ACAGTGTGTC TTAGGATTTT TTTAAGTAAA TTAAGGATGT TTACCAGAAA TTATTGATTT 002000
002001 ACTGAACCAA GTATTTATTT TCAGAAGCCC ACTTTTGGGG AAGGTTGCCT ATATTTTTGA TAGTAATTAG ATGGAAGATT 002080
002081 AAATCCTGTT TAACCTGGAT AGAAACAGTT TTAACTATTG CTGAAGTTAA AATCACTTTG GGGTGGGGTG GGGTGGCTCA 002160
002161 TGCCTGTGAT CCCAGTGCTG TGGGAGGCTG AGGCCAGAGG ATTGCTCGAG GCCAGGAATT TGAGACCAGC TTGGGCAACA 002240
002241 TAGCAAGACC CTGTCTCTAC AGATAATTGA AAAGTGAGCC AGATGTGGTG GCGCATTCCT ATAGTCTCCG TCTCTCAGGA 002320
002321 GGCTGAGGCA GGAGATTGCT TGAGCCCAGG AGTTGGAGGC TGCAGTGAGT TATGATCATA CCACTGCACT CTAACCTGGG 002400
002401 TGACAGAGTG AGACCCTGTC TCTAAAAAAC AAAAAATTAG AAAACAACAA AAACCACTTC GGTTACTCAC TGTCCTCATG 002480
002481 CTTTGATGTC AGTTGTTCTC CTAAATTTTA AAATTTTGTT ATGAAGATTG GATGTACACT GATTTGGCCC TTTAAATGAC 002560
002561 ATTATACCAA GAAGTTGGTA TAAGGGAGTA GGAGATGAGA AAACTTTTTG AAAAATCATT TGGTGCATGC TAAGGTAGCT 002640
002641 TGTAGGACAT GTGGTTTTAA AAAATTCATG GATTTTGAAG AAGGATAGGG TGGAAGTAAA ATTTAGCTGA TAGCATAGGG 002720
002721 ATCATTTGTG ATTTATATAG AAAATAATTA TATTTTTGAG TGAGAAGCAT CAGACTTAAA TTTTTTTCTT CTATTTTGGT 002800
002801 TATTACCAAA AGGAACAGAG AAACTCTCAG AATTCTTTGA ATCATAGAAT GTTAGTGCTG GAAAGGACTA GGAAGTGACT 002880
002881 TGTACAACCC CTTCATTTTA CAAAGGATCA GAGAGAATTG GTTAGTAGAG TCCCAAATCT GCTTTTAGAA GTAATATGGT 002960
002961 GATCATCAGT TTAGATTCAC TGTAGGAAGG GCAGCCCTGT TAAAGTTTGT CAGGAGAAAA AGGGAAGGTA TCACTTTTTG 003040
003041 TATGTTCACC CAGTTGCTTC TGTAGTTTTC ATACCCCTGT TTTCTCAATT TTCTTAGAAC TGTCTTTAAT GGCCCAGCTC 003120
003121 TACCAGGGCT TGTTGTCTAA GGACATTAAC TTGTGCTCCC CTCAGGGATG GGTTTACTAC TAGCTGTCAG AAAGCTATTG 003200
003201 GGTATCCTAA TGTGTTAATA GCTGAAACTC AGCTGTAATT TCTCCTAAAT ACTTCAGCAT TTTGCATTCT GTACATTGTG 003280
003281 GTGCTTTTTC CACCTTGTAT TGTTGTAACT GTAAGCTCCT AGGGGGCAGC AATTTGGTCT TAGGCGTGTA CCCTGTTTAG 003360
003361 TGCCTGGCAA TGCCATGTTT ATATCAAGGT CTTAATATTA CTTTTGAGTT ATTTCTCCCA CTCTTCATGG AAGTGATGCT 003440
003441 CCAGCCTTGC TAAAACACTG AGGGTCCTCC CGATAAGCCA GGCATTGTGA TTCCTTGGCT TCAAGTGCCC TCTGTCTTCC 003520
003521 CCGAAGGTCC ACTGAGATCT ACAATCCCCC CTTTCCTCTG ATCTCTTGCC ATGTAAGTAA TTTTTTAAAA GATCAGTACA 003600
003601 AGAGCTATAT TTTTTCCTAA GAAAAAATTT CAACAGGAAT GGGGAGTAGC CCCGTTTTGG GGCTGATCTG TCCAGAATTT 003680
003681 GGAGTGAGGA ACAAATCCAT TCTCATCTAC TTTCCACATT TTCCCTCTTG TTTGAGGTCC TGTTCCAACC TTCATTTCTG 003760
003761 AAACTGTTCT AGAGCACTTT GTCTTTCTCG TAGTTCATAA CTTACCCCTT CAGTCTAGAA TTAGAATTAC ATTATCTGTT 003840
003841 TTACTACTTT ACTAGACTGT AAGCTCCTAG AAGATAAGGA CTAGGGAGTT CATCTCTGTA TTCCACCAGA AGGTACAGTG 003920
003921 ACTCATAACT AGAGTCTTTA GATGAAACTT ACTGAGTTGA ATAACTTAAT ATATTTCTGT TTTCATTCCC AAGGGAGGCC 004000
004001 ATGTCTGGAG ATAGACCTTG AATTTAATAA ATTTTAGGCA CTATACCATT TCAGTGGAGA AAATTGTTGG GAAATTTGGG 004080
004081 GGGATGGATA TATAAGGGGG AGGAAGTCAC TGGCCAGTTT GAGGTGCTTC CATTGGTCTG GGTAACTAGC CATTTCTTCC 004160
004161 TGATTGTGCC TAGTATATCC CAGACAGTTT GTTTCTATGC AGAAGAATTT TATATGAAAT TTTCATTTCT TTGCAAAAAC 004240
004241 TTGTTCCTTC TTTCAGTTCA TGACATCATC CATGCTAAAG TCTGAGTCAT CTGCTTCCAT TTTTGTTATT CCCCACATCC 004320
004321 AGTCTTCAGC TAAGTCCTGT CAGTTCTACC TCAAGTCTTT CCCGTCTTTC TTCCTCACCT ATGTAATTTC AGTAGTCTCT 004400
004401 CAGCTTCACT TAACCTTACT CCAGCCTACT TTATACACAA TGTTAGATTC ATCTTACTGA AACATAGTTC TGACCATGTA 004480
004481 TTCCATGTAT GTGTTCTCTC TCCCCTATTA GACTGTAAGC TCCTTATGGG CAGGATCTGT GTCTGAGTCA TCTTTGTATC 004560
004561 TTGCCTAGCA CCTATCAATA AATACTTCTT GAATG
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Predicted Small Protein

Name NONHSAT104639_smProtein_4259:4459
Length 67
Molecular weight 7431.5749
Aromaticity 0.136363636364
Instability index 63.0653030303
Isoelectric point 7.91302490234
Runs 12
Runs residual 0.0312103066594
Runs probability 0.0413501737031
Amino acid sequence MTSSMLKSESSASIFVIPHIQSSAKSCQFYLKSFPSFFLTYVISVVSQLHLTLLQPTLYT
MLDSSY
Secondary structure LLHHHLLLLLLLLEEEELLLLLLHHHHHHHHHHLLLEEEEEEEEHHHHHHHHHHLLHHHH
HHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
LLLLLL
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