NONHSAT104366
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104366 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
513 nt |
Genomic location |
chr5+:143901703..143902551 |
Exon number |
2 |
Exons |
143901703..143902040,143902377..143902551 |
Genome context |
|
Sequence |
000001 CCATTCTCGG CAGACTGTTG ATATTTCAGA AAATGTCAAC ACCACTCTGA AGGGATGCGT AGTTTTTGTG AAGGGCCCCA 000080
000081 GAGGAAACCT GCAGAGAGAC TTCAGTCACA TCAATGTAGA ACTTAGTCTC CTTGGAAAGG AAAAGAAGAG GCTCAAGGTT 000160 000161 GACAAAAGGG GGGAAATAGA AAGTGGCTAC CGTTTGTGCT ATTCATAGTA GCATACAGAA CATGATCAAA GGTGTTACAC 000240 000241 TGGACTTCCA TTACAATATG AGGTCTGTGT ATGCTCACTT CCCCATCAAT GTCATTATCC CTGAGAATAG GTCTCTTTTT 000320 000321 GAAATCAGAC ATTTCTTGCA GTATATCTCA AGCCCAGAAA GATGACTTAA TCCTGGAAGG AAATGACATT GAACTTGTTT 000400 000401 CAAATTCAGC TGCTTTGATT CAGCAAGCCA CAACAGCTAA AAACAAGAGT ATCAGAAAAA TTTTGGATGG CATCTATGTC 000480 000481 TCTGAAAAAG GGACAGTTCA GCAAGCTGAG TAA |
Predicted Small Protein
Name | NONHSAT104366_smProtein_221:364 |
Length | 48 |
Molecular weight | 5680.5208 |
Aromaticity | 0.148936170213 |
Instability index | 64.2765957447 |
Isoelectric point | 8.24749755859 |
Runs | 9 |
Runs residual | 0.0252127659574 |
Runs probability | 0.0496182456968 |
Amino acid sequence | MIKGVTLDFHYNMRSVYAHFPINVIIPENRSLFEIRHFLQYISSPER |
Secondary structure | LLEEEEEEEELLLLEEEELLLEEEEELLLLLHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |