NONHSAT104180

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT104180

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1230 nt

Genomic location

chr5-:139713109..139714715

Exon number

2

Exons

139713109..139713865,139714243..139714715

Genome context

Sequence
000001 attacaggca tgagccaccg tgcctagcTC TATGCCTGTT TTCAAGCAGt gtaactcatc tgtcatgaga cctggaacaa 000080
000081 gttactgtct ttctgaggat tgtaaccttg tagtgattgt aatgtttgtc catctacctc ataaggatgt tgtgaggatc 000160
000161 acgtaaatga ggtgaaagct atttgtaaat tgcatcctgc tatTAGAGAC AGGAGTTCCT CGGGGCAGTT GGGCCTTTGA 000240
000241 CCAGAGTTTG GGCTGCCCTA CTGCCTGGGC TTTTCCAAGT AGTAGAGGAA ACCACCATGG CAGAGTTCTT TGGAAGGACC 000320
000321 TGCTCTGGAC CTGCACTTTG TCATAGCAGG CAGGGCTTAT TCACAAAACT TATCTTCCTC AGGTACCATA GGAGAGGAGG 000400
000401 TTATGATGTG GAAAATGAAG AGAAAGTGAA GTTGGGCATG ACTAATTCCC ACTGAGAGAG ACTTGTGCTC AAGGAATCGG 000480
000481 CTGGGGACTG CTACCTCTGA GAAGACACAA GGTGATTTCA GACTGCAGAG GGGAAAGACT TCCATCTAGT CACAAAGACT 000560
000561 CCTTCGTCCC CAGTTGCCGT CTAGGATTGG GCCTCCCATA ATTGCTTTGC CAAAATACCA GAGCCTTCAA GTGCCAAACA 000640
000641 GAGTATGTCC GATGGTATCT GGGTAAGAAG AAAGCAAAAG CAAGGGACCT TCATGCCCTT CTGATTCCCC TCCACCAAAC 000720
000721 CCCACTTCCC CTCATAAGTT TGTTTAAACA CTTATCTTCT GGATTAGAAT GCCGGTTAAA TTCCATATGC TCCAGGATCT 000800
000801 TTGACTgaaa aaaaaaaaga agaagaagaa ggagagcaag aagGAAAGAT TTGTGAACTG GAAGAAAGCA ACAAAGATTG 000880
000881 AGAAGCCATG TACTCAAGTA CCACCAAGGG ATCTGCCATT GGGACCCTCC AGTGCTGGAT TTGATGAGTT AACTGTGAAA 000960
000961 TACCACAAGC CTGAGAACTG AATTTTGGGA CTTCTACCCA GATGGAAAAA TAACAACTAT TTTTGTTGTT GTTGTTTGTA 001040
001041 AATGCCTCtt aaattatata tttattttat tctatgtatg ttaatttatt tagtttttaa CAATCTAACA ATAATATTTC 001120
001121 AAGTGCCTAG ACTGTTACTT TGGCAATTTC CTGGCCCTCC ACTCCTCATC CCCACAATCT GGCTTAGTGC CACCCACCTT 001200
001201 TGCCACAAAG CTAGGATGGT TCTGTGACCC
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Predicted Small Protein

Name NONHSAT104180_smProtein_296:454
Length 53
Molecular weight 5989.8058
Aromaticity 0.115384615385
Instability index 46.2384615385
Isoelectric point 9.23565673828
Runs 8
Runs residual 0.00347674923946
Runs probability 0.0255034446211
Amino acid sequence MAEFFGRTCSGPALCHSRQGLFTKLIFLRYHRRGGYDVENEEKVKLGMTNSH
Secondary structure LLLEELLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLHHHEEELLLLLL
PRMN -
PiMo -