NONHSAT104124
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT104124 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1093 nt |
Genomic location |
chr5-:139120549..139125817 |
Exon number |
3 |
Exons |
139120549..139121225,139124755..139124844,139125492..139125817 |
Genome context |
|
Sequence |
000001 CTGGGGGTGG GGGAAGGCTC AGAAGCTCCA AGGTTTCATG TAGGGCTCCC CAGGCCAAGC TTTGAGGGAA GATGgggagc 000080
000081 ttagatatag ttttgtccag ctttcacgat acaaatgacc aacttgagtc tggagagaca gagaggtgga gcttggcctg 000160 000161 gatcCAGGAG ATGAGTTCGG CCTAGCGCTC TGCAGTGGGC CCACCACCCC TGATACCTAG ACGTGTGGTC ACCTTGGCGG 000240 000241 TGGGGAGGAG GGGCTTGGTC CTGGCAACCC CTCTCATCCA ATAGCAAGAG AGGGGCTGAT TCAATGGTTT GAGGGGGCAG 000320 000321 GAGCAGTGAC ACAGCCTGGA GACCCAGCTC TGTCACTCAA CTCTACATAG CCTTCACCCA GAGCCTGACA GTGTATATGA 000400 000401 ACAAGAGGCT GTGCCTGGTG AGTGCTTCTG CCACTTTCTC CAGGATGACA GCTGTGGACT CCTGCCACAT CCAACACCCC 000480 000481 CTTGCTGCTC CCCACCGCCC TCCTTGGCAC CCAGGTGGCT GATCTCCTAT GGTCTTGCTG GCTTCTCTAC CTTGTATGCT 000560 000561 GAGGGCGGGC CCAGCCTGCC CCAGCTCAGG GTCTGCACAT AGTAGGTGCT TGCATGTTGC CTGCTAAACT GACAGCCCTA 000640 000641 TAACCATGTC AGCACAAAGC AACCAGCATT TTGGGTGCAT CTGCAGTTAA AATAAACCAC TGAGGTCATG GGTCTGTTCT 000720 000721 CTCTGCAAAA ACAAAAATAC CCCACTAGCC ATATCTGATG AGAACCATAG CAAAAGATCA GAATGTAATG GCTTCATCCA 000800 000801 GAAGCAAAGC ATGAGGTTCC AAACCATGTC CCTGACCTGA AGGGGCACCT GCCCAGGCCC AGGGGTGCCA ACTCCTAGAG 000880 000881 GCAGCTGGCA TGTGACTACT GTGCCCAGTA GAGAAAGGCA GACACTCAGT CCCCAGAGCC CAGAGCCCCG AGGGAATTAT 000960 000961 GGAACATCCT CCATATTTGA TTCAAAATAA AAACCACAGT AAACCATAGA CCCAAAACTT ATACGTCGGC TGAAATTAAA 001040 001041 ATAGCTTCTT GCTACGTTTT CTGGTTTCAA TATTCTGGAT AAACTCATGG AAG |
Predicted Small Protein
Name | NONHSAT104124_smProtein_71:184 |
Length | 38 |
Molecular weight | 4171.489 |
Aromaticity | 0.0810810810811 |
Instability index | 50.6567567568 |
Isoelectric point | 3.94622802734 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0433492315846 |
Amino acid sequence | MGSLDIVLSSFHDTNDQLESGETERWSLAWIQEMSSA |
Secondary structure | LLLEEEEELLLLLLLLLLLLLLHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |