NONHSAT103712
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103712 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
545 nt |
Genomic location |
chr5-:131329448..131347510 |
Exon number |
2 |
Exons |
131329448..131329944,131347463..131347510 |
Genome context |
|
Sequence |
000001 AGTGCGGGGC AAGCCCCAGA CCCGGCCGGC CAGGCTGCAG GGCAGGGAAG TTTGTCCTCT CACTTCTGGA GAAGATGCAG 000080
000081 ACACAGGAGA TCCTGAGGAT ACTGCGACTG CCTGAGCTAG GTGACTTGGG ACAGTTTTTC CGCAGCCTCT CGGCCACCAC 000160 000161 CCTCGTGAGT ATGGGTGCCC TGGCTGCCAT CCTTGCCTAC TGGTTCACTC ACCGGCCAAA GGCCTTGCAG CCGCCATGCA 000240 000241 ACCTCCTGAT GCAGTCAGAA GAAGTAGAGG TGAGCAGGAT AGGAGACGTT CCACTGCGGA AAGTAGGGGG CAGAGGACAG 000320 000321 GCATCTTGGA AGTAGAAGCC AGACTTGTGG CTTATTTGAC CTCACATGGC CCAGAGAAGG TGTCTCCCCT GGCAGTCAGC 000400 000401 CACTTAGCTC TGCAGCAGCC TTGGGCAGGG TCTCCTACCA GGCACTCCTT CTGCCTCTCC CAGGAACTGC CTCTGGGTAG 000480 000481 AGCCTGACCT GGGCCTTGCA CTGGGCCTCT AGTTTGCCTG CTTCTCGGGT AGGAGGGCCT TGGCT |
Predicted Small Protein
Name | NONHSAT103712_smProtein_74:334 |
Length | 87 |
Molecular weight | 9594.1333 |
Aromaticity | 0.0697674418605 |
Instability index | 55.1941860465 |
Isoelectric point | 9.61578369141 |
Runs | 9 |
Runs residual | 0.0349704963554 |
Runs probability | 0.0547802704666 |
Amino acid sequence | MQTQEILRILRLPELGDLGQFFRSLSATTLVSMGALAAILAYWFTHRPKALQPPCNLLMQ SEEVEVSRIGDVPLRKVGGRGQASWK |
Secondary structure | LLHHHHHHHHLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL LEEEEEEEELLLLLEELLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii iiiiiiiiiiiiiiiiiiiiiiiiii |