NONHSAT103253
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103253 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
852 nt |
Genomic location |
chr5+:112312510..112320348 |
Exon number |
2 |
Exons |
112312510..112312683,112319671..112320348 |
Genome context |
|
Sequence |
000001 GTCGTCTCTG CCGCGGCTTC CTCGGCTGCC AGCTCTCCGG CGAGCCGGAG TCCTAGTGCC GTACCGTCAG TCCCCGGCCG 000080
000081 CGCGGAGCCG GGATGCACTG TTCCTGCTGT GGGTCCTCAT CATGGAGACC AAACGGGTGG AGATTCCCGG CAGCGTCCTG 000160 000161 GACGATTTCT GCAGgatatg tgaggattac ttcatgaaaa caaggaagtg aattaaggag gatgaaaaca aaaagacaag 000240 000241 acacatgacc tctgtgggat aaaggcacag ggaactatag gatgcttgtg aaagggcagt gtagagttga cagatgtgta 000320 000321 ccaggtgtag aggacagctg atccagacta gaacagatca gaagactaga agtcttaaag atgaaactga tGAATCTGAA 000400 000401 TTGTGGGGAA AAAAAATCCA AAATGAAACT GATGGATCTG AAAAGAAAAT TCACAATGGA GATGATTATG TCAGAATATC 000480 000481 CAAAAAGGAG CCAGGAGGGC ATAAGGAGTT GGATCCTGGT CACATACACA TCTAGATGGA GTTTCACCTG CTGAACTGGG 000560 000561 CCAAAGTGTA AAACTAGCTG CATTTGACTT GAGTTGTATA TACTGGGCCT GATCAACCGC CTGGAGAGAT AACCATACCC 000640 000641 AACTATATTG ATCATTGACT AGAGACATCC TGAGCTGACA ACCAGCCATC ATTTATCATG GACTGTGCTA AAACCTTCCA 000720 000721 GATACGTAAA TTTACAGTAG CCCTTAAAAG CTCTGCCTAA CCTTGCCTGA ATGCAACATG ATTTAGCTGC TTGCTAGACT 000800 000801 TGTGTCTCCC AAATTGCAAT CTCTAAAAAC CTGATTAAAA TGCCTTTTGC TA |
Predicted Small Protein
Name | NONHSAT103253_smProtein_380:553 |
Length | 58 |
Molecular weight | 6916.2749 |
Aromaticity | 0.105263157895 |
Instability index | 68.4526315789 |
Isoelectric point | 9.86224365234 |
Runs | 9 |
Runs residual | 0.00394736842105 |
Runs probability | 0.0391764313333 |
Amino acid sequence | MKLMNLNCGEKKSKMKLMDLKRKFTMEMIMSEYPKRSQEGIRSWILVTYTSRWSFTC |
Secondary structure | LEELLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLEEEEEEEELEEEEEEL |
PRMN | - |
PiMo | - |