NONHSAT103034
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103034 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1662 nt |
Genomic location |
chr5-:101944196..102007168 |
Exon number |
3 |
Exons |
101944196..101945470,101971847..101971995,102006931..102007168 |
Genome context |
|
Sequence |
000001 gactcggaaa gggaactccc tgaccccttg cgcttcccga gtgaggcaat gcctcgccct gcttcgactc gcgcatggtg 000080
000081 cgcgcacgca ctgacctgcg cccactgtct ggcactccct agtgagatga acccggtacc tcagatggaa atgcagaaat 000160 000161 caccagtctt ctgcgtcgct cacgctggga gctgtagacc ggagctgttc ctattcggcc atcttgtctc ctcccGTGTT 000240 000241 TTCCAGGTGT ATTCCACATT GTCTCTACTA GTGAACTAGG ATAATCCATT GTGTATCTCA ACCTCCTTCA CTACCCTGTG 000320 000321 AAAGTCACAT GTGAGAAGAA GCATCACAGA TGATTCCATG GAGAACATCC TGGAAGTTCT CCAAATGAAC TGGAAATTCC 000400 000401 CTGTCTCCCC TTAACCAGCA CTGGAAGCAG ATGGGAAGAG AATAGCTGTG ACTGACTCAC ACTCTAACCC AGCAACCCTC 000480 000481 AGCATACAAG TGGGAGACCA TAAAGTTTTT CAAGACCCCA AAAGAGGCCA AAGGTCTGAT AATTGCTGGG AGAAGGTCCA 000560 000561 CTATCCAAGA AGAGAAGAGG AAAAGGAATT AAAGTCTCCA AGCACTGGGG ATGCAAGAAG AGAGTTGCAC AGGAGAGAAA 000640 000641 GAAGAAGTTG TCCACGGGGT GACCCTGCAA TTGGAGGGAA ATGCATGTGG ATATGTGCAG GGAGTCTAGG AAGTGAAGCC 000720 000721 TTAGTGATCA TTTACAAGAA TGAGGGTTAG GTAAAATAAG GGATGCAAAG CCACCTGTAG TCTATTCTAA CCTCACTCCA 000800 000801 TCACTCTATA CAATCTGTGT TTTATCATCT GAAATGTTAA GTAAAGACCT GTTTGGGTCT TCTTCAGAAT CCCATACATT 000880 000881 TGAGTTCATT AGTCAGAAAA AGGGAAAATA CCACCACCCC ATCCTGGAAT GGCAGTCATG TACACTTTTA TAATGAGAGA 000960 000961 TTGGGCAGCA AAGGGGGCCC CTTGTGGACC TCACCCAGCC AGAGAAGGAG GCAGAATGTT TCCTTTACTA TCTTTTCCTC 001040 001041 TCCCCAGAGG AACACTACAT ATTGTTCCCT CCATGGGCTT AAGAGAAGGT GCCAGGGTTA CAGATAGATA TATCGCTAGC 001120 001121 TGTAGAGCAC AGGGTGAATT GGGATGTCCA TGTACAAAGC TAGGGACAGG AGAATCAGTT TAAAGACTTT AAAAATAATT 001200 001201 AGGAAAAAAA GGAAGGCCTG ACCCAAAGCT TAGGAGTGCA GGTAGAGAAG AGATGGTGCC ATGATATACC ATGTCTCTGG 001280 001281 GACTTTTCTG TATTCCTCTT CCTCTGTATA CTGTATTGCC CTCATTCCCT ATTTATTCAA AATCTGTGCT ACCTCCACTG 001360 001361 CGAAGACTTC CACGAGAAAA TTCAGATATT TCTTCTTTTG TGGACACTTT CTACCTTACA AATAAGTTAA TTTTAATTCA 001440 001441 AGGAAGAGTT TTTCCGGAAC CCTGTTGGCC TGCTCACAGG AATGTAAGTT CCTTAAATCT AGGGCACAGT GTCTTTGAGA 001520 001521 ACTGCAATCA CCTACATCAA CATGACATAG CTATTAGGAC TAAGAACAGA GACCACCTGT GTCAACATGA GTTACTATTT 001600 001601 TTTTCCGTGA AACATTTGTC CAAGAAAGAT AAGACTGTAA CCAATAAATA GTTTGCAAGT AA |
Predicted Small Protein
Name | NONHSAT103034_smProtein_833:952 |
Length | 40 |
Molecular weight | 4541.1235 |
Aromaticity | 0.128205128205 |
Instability index | 62.8076923077 |
Isoelectric point | 6.80987548828 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0214773597126 |
Amino acid sequence | MLSKDLFGSSSESHTFEFISQKKGKYHHPILEWQSCTLL |
Secondary structure | LLLLLLLLLLLLLLLEEEHHHHLLLLLLLLLLEEELLLL |
PRMN | - |
PiMo | - |