NONHSAT103012
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103012 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1619 nt |
Genomic location |
chr5-:100206203..100207715 |
Exon number |
1 |
Exons |
100206203..100207715 |
Genome context |
|
Sequence |
000001 GAACTAATGC CCATTTCAGA AATCATGAAT ATTGCCAGCT ACAGATGTTG TTTTTTTTAT TTAAATTACT CTTAAGTTCT 000080
000081 TTGTTTAGCC TCCTAAATGA CTCACTTAAG AGGAGTCATA TATAAAGAGA ATTTAAACCT TTACAAGAAA ATACAGAACT 000160 000161 AAGAAGAGTG ATACAGTGAA ATGTTCTAAA GATTAGGGAT CAGAAAATCT GGGTTCCTAT TAATTACTAT AAATGTAATA 000240 000241 TTAGACAACC ATCACTATTT TCACTGTTCA GTGAGGTCAA TAATAATAGG CCTATTAACA GCAGAGTGAT TTTCTCATTT 000320 000321 ATCAGATGAG AACATAGTAA AGAAAAGCAC AAACTGTAAA ACAAAACTCA TAATGAGTGA TGCTAAAGGA CATCTTGTTT 000400 000401 GAGTTCATCG TCATAGGTAA AACTTAAAAT TGGCACTGCA TTTTCTAACA GCCATGGCTA AAAGGAAAGC CTGTTGACTA 000480 000481 GAGACACAAA TTATTATTGT CTGATATGAA TAAGAAGATG AACTTTCCCC AAATTTATCA AACATATGTA AAGTTGACAC 000560 000561 TAAATAACTG GATAAAACTG ACACTGAATA ATATGTTACA CAATGTGATA TAAAAAACAA AGCAATATCA CTCAGATAGG 000640 000641 AGTGTCTACA AAATCTGAGT ATGTAAAATT AGATATAAAT GTAGTGAAGA TATATATGTC TTCAGAAAAC TAAGGTAATA 000720 000721 TGGTAAAGAT ATATTATTTA ATGATAATCT ATATTCCTAA AAGTAGGGAT GATATTTTTC CCAAAGAAAA AGGATGGAGG 000800 000801 AATTGACTGG CTGGTACAAT GCATTTTATA ATTCAATCGA TTTTTTATTC TCCACCGGTA GATAATTTAC AGAAAGCTTT 000880 000881 AAATCACCTT CTTGACCTCC TTGAATGCTA ACTCTTTTAT GACAAAATAG ACTTTTCTGG AACAGAAAAA AAATATCTTA 000960 000961 TTTTTCTACA TGTTCACAAT GAATGGCCTT AAGACTTTAT CCTTCCACTC TCACAGAGGA TATGTATTCC CTTAACTCAA 001040 001041 ACAGCAAATA GCAAACAGCT AAGTTCATGA TAGACAGCCA AGTCTAGGGC ACTAGAATGA TGTTTTTAAA ATTACTACTA 001120 001121 AAACGAATAA CCACTTATAG TTTAGGAATA GTAACATTGC TTATCTAATA TTTGCTACAC ACATTTTCTC CAGTAATTTT 001200 001201 GCTTAATACC TTATTCATGA TTTTGATCTA TGAAATTTTA TAATTTGTAT AAAACTAATT AAATTGTGAT TTTTGTTTAT 001280 001281 TGATTTTAAA TGCAAAATTT ATGTTATATG TAGAAATATG ATTTATATGT TGTTCTAATT ATGATGTTTA AAATTTAACT 001360 001361 TAAAACTACA CATGAAATAT GAAATATAAG TTGTGATGAG AGGTACAGCT CTTTATTTCT AATTATGTCA CTCCTCACAC 001440 001441 AGAAATTATT TTATCTACAA GTAAAAATTT TAAAAAATGG AAATGATGAC AATATCTAAA ATTTTAAATG TTTTAAATGT 001520 001521 TTTCACCCAT TTTCTGAAAC AAAGATTGTA AACGATTTTT CATATATCAG TCTAACAAAG ATTTTTAAAA TGTTTACTAG 001600 001601 TCAGTAAAAA GTTACATTG |
Predicted Small Protein
Name | NONHSAT103012_smProtein_818:910 |
Length | 31 |
Molecular weight | 3513.0906 |
Aromaticity | 0.1 |
Instability index | 98.807 |
Isoelectric point | 5.20379638672 |
Runs | 6 |
Runs residual | 0.00225225225225 |
Runs probability | 0.0295295295296 |
Amino acid sequence | MHFIIQSIFYSPPVDNLQKALNHLLDLLEC |
Secondary structure | LEEEEHHHHLLLLLHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |