NONHSAT102640
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102640 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
628 nt |
Genomic location |
chr5+:87582903..87587291 |
Exon number |
2 |
Exons |
87582903..87583439,87587201..87587291 |
Genome context |
|
Sequence |
000001 AAAAAAATCA ACTGAAACAA AAGAATAGAC TGAATTTGCC AAAAGAGTGC TTAAATGGAG ACCTAAGTCT TCAAAGCTAA 000080
000081 GGTGATGAGA AAAGAACAGG TCTTAAATTT CTTCAGAGCT TCAAGAGGCA AAGCTTGAAA GAAGAAAAAA TTTTATTCTT 000160 000161 AGGTAAGATG TAGGggtaga atggtggccc ctgcaaaagg taagccttcc tcctaatcct agaatcgtgg atggtacctt 000240 000241 atttggataa aaaggtcttt gcagatgtaa ttaagaacct tgagatgagg agatcatcct ggattatctg gtggactgta 000320 000321 aagtcaatga catgtattca tatatgacag aagagaagac atggagaaga ggagggagta gttgtgaccg tggaggcaga 000400 000401 gaatggagta atgtgatcat aaatcaagga atgctgacag ccactaaagc tggagaaggc caaggacaga tattcaatcc 000480 000481 tcccgtagaa gtacagccct gctaatgcat tgattttgga cttctggcct cagaactATT TATATATCAG CTTTTTATCA 000560 000561 GTTGAAATAA ACCACCCTGg gccgggtgca gtggctcaca cctgtaatcc cagcactttg ggaggccg |
Predicted Small Protein
Name | NONHSAT102640_smProtein_230:346 |
Length | 39 |
Molecular weight | 4639.5742 |
Aromaticity | 0.131578947368 |
Instability index | 44.9289473684 |
Isoelectric point | 9.51409912109 |
Runs | 8 |
Runs residual | 0.0379155124654 |
Runs probability | 0.0396683448155 |
Amino acid sequence | MVPYLDKKVFADVIKNLEMRRSSWIIWWTVKSMTCIHI |
Secondary structure | LLLLLLHHHHHHHHHHHHHLLLLLEEHHHHHHLEEEEL |
PRMN | - |
PiMo | - |