NONHSAT101953
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101953 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
761 nt |
Genomic location |
chr5+:69359238..69366582 |
Exon number |
6 |
Exons |
69359238..69359313,69361792..69361911,69362761..69362961,69363121..69363273,69365062..69365157,69366468..69366582 |
Genome context |
|
Sequence |
000001 CCAGAGCGAT GATTCTGACA TTTGGGATGA TACAGCACTG ATAAAAGCAT ATGATAAAGC TGTGGCTTCA TTTAAGCATG 000080
000081 CTCTAAAGAA TGGTGACATT TGTGAAACTT CGGGTAAACC AAAAACCACA CCTAAAAGAA AACCTGCTAA GAAGAATAAA 000160 000161 AGCCAAAAGA AGAATACTGC AGCTTCCTTA CAACAGTGGA AAGTTGGGGA CAAATGTTCT GCCATTTGGT CAGAAGACGG 000240 000241 TTGCATTTAC CCAGCTACCA TTGCTTCAAT TGATTTTAAG AGAGAAACCT GTGTTGTGGT TTACACTGGA TATGGAAATA 000320 000321 GAGAGGAGCA AAATCTGTCC GATCTACTTT CCCCAATCTG TGAAGTAGCT AATAATATAG AACAAAATGC TCAAGAGAAT 000400 000401 GAAAATGAAA GCCAAGTTTC AACAGATGAA AGTGAGAACT CCAGGTCTCC TGGAAATAAA TCAGATAACA TCAAGCCCAA 000480 000481 ATCTGCTCCA TGGAACTCTT TTCTCCCTCC ACCACCCCCC ATGCCAGGGC CAAGACTGGG ACCAGGAAAG CCAGGTCTAA 000560 000561 AATTCAATGG Cccaccaccg ccaccgccac caccaccacc CCACTTACTA TCATGCTGGC TGCCTCCATT TCCTTCTGGA 000640 000641 CCACCAATAA TTCCCCCACC ACCTCCCATA TGTCCAGATT CTCTTGATGA TGCTGATGCT TTGGGAAGTA TGTTAATTTC 000720 000721 ATGGTACATG AGTGGCTATC ATACTGGCTA TTATATGGTA A |
Predicted Small Protein
Name | NONHSAT101953_smProtein_89:367 |
Length | 93 |
Molecular weight | 10830.9608 |
Aromaticity | 0.0869565217391 |
Instability index | 67.6054347826 |
Isoelectric point | 10.6331176758 |
Runs | 15 |
Runs residual | 0.0278385986863 |
Runs probability | 0.0346581875994 |
Amino acid sequence | MVTFVKLRVNQKPHLKENLLRRIKAKRRILQLPYNSGKLGTNVLPFGQKTVAFTQLPLLQ LILREKPVLWFTLDMEIERSKICPIYFPQSVK |
Secondary structure | LEEEEEEEELLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLEEEELLLLHHHH HHHHLLLLEEEEELLEEEEELLLLEELLLLLL |
PRMN | - |
PiMo | - |