NONHSAT101109
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101109 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
746 nt |
Genomic location |
chr5-:38791159..38796568 |
Exon number |
2 |
Exons |
38791159..38791790,38796455..38796568 |
Genome context |
|
Sequence |
000001 TTCAGTGATG TTGAGAGTCA ACAGGAAATT AATCAGCAAG TAGAAAATTG AAAGAAGATC TGCATCTTAC TGCAGGAGTC 000080
000081 ATTAAAATAA AAGCAGATTT GGCAAAATGG CAAGtggagg aagacttctc acacacagtt taaggatgag gaaatgaagg 000160 000161 cacagagcag ttattcaact tgtctaaggc cacacggcta ctaagaatca ttgccaggat GTACCTCCAG TTTTATAGGT 000240 000241 TTTGGCCACC GTGTGACGAC TCCTTCCCTC TTTTGATGGA TATCCAGAGA GCACCTTGGG CAGCTACCTG ATTCTTACGA 000320 000321 CCACCCCCTC CCAGTTTTGG ACCATCAGAG CTGTTGTCAG AATGTCTTCA TAGGAGTCTC CCAACCTTCT ATTTTTCCTT 000400 000401 TGAACTTTGA AAATCTACCT CCGAATATTG CAAGCTCATG TCTAACTGAG CTAATGATAT TCCTCCATTT TCCCAAAAGT 000480 000481 TTAAGCtgcc actgtctttt agttgctatt ttcttaacta actagtttgt tctgatgggt caaaattaag ggcttttgat 000560 000561 aaggagaaca gttattatat tttttcagac ttctgggaga tgaagccaca tgaagaattt attgcatttg ttgttcttag 000640 000641 ctgaCCTTAC CCTGATTTTA CCACATAATA AAATGCTTTG AGTCCTGCAT TCTACTGGTT ACTTTGGGTT TTGTTTGTTT 000720 000721 GTTCATTGTT AACCACAACT GAACTT |
Predicted Small Protein
Name | NONHSAT101109_smProtein_218:310 |
Length | 31 |
Molecular weight | 3680.2359 |
Aromaticity | 0.233333333333 |
Instability index | 54.7603333333 |
Isoelectric point | 4.42791748047 |
Runs | 5 |
Runs residual | 0.0355855855856 |
Runs probability | 0.0360007065889 |
Amino acid sequence | MYLQFYRFWPPCDDSFPLLMDIQRAPWAAT |
Secondary structure | LLLEEELLLLLLLLLLHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |