NONHSAT100951

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT100951

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6998 nt

Genomic location

chr5-:33433900..33440897

Exon number

1

Exons

33433900..33440897

Genome context

Sequence
000001 CTACTCTCCG CTGACCTTGG TCTGGACGCT TTCCAGAGTC AAGTCCCCAA TGCGCGTGCG CCTTTCCTCC CTTCTGACTT 000080
000081 TATGTGGAAC AATCATGGAC CTTCCCGGAC ACCGTAGATA ATAAGTAGGT CTTGGTCTAA ACTTCCGGGA AGTTTTCGGC 000160
000161 GACCTGGATA CCATCTTCGA CACGGGGACA AATCCCGGGA TGGAGTCCAG GGTTTCCCGC GGCTTCGGCG CTTCCTGACC 000240
000241 TGGCGTGACT GCCGACTTGT CGGCACCACC CAGGCCTCAG GCTCCCTGTC TGTAGTGGTG AATCGACCTT CCTCATGGCA 000320
000321 GTCCAGGCTT CCCAAGCCCC ATGTCCTGTT GATCCGGGAC AAACTCTTCC TTGAACGTTC TTCACTACGA GCCGCTGCTG 000400
000401 ATCTGTACTG CCTGGAGGAG CATTTCCATA GCGCCCGCAA AAATACAATA AAGCTCACCC AAGGAAATAA CCATGGATTC 000480
000481 TCACGCCTGG GTGCCAGTGT TTGGAATCGA CTGGGCTTTT TTATGTTAGT AGGCAATTTA AAACAATTAC TTATTTGAAA 000560
000561 TCAGAAGCGC AATAGGCATA ACTTCAGGTA CGTGCTCCAC CACCACGTTT TGTGGATTTT TCTTTTTAAA CATCAGTTCT 000640
000641 GTTCTCTACA ACTCTCCGCC TTCAGGGTTA TACTTTCCAG GAACAATAgc ttcccaattc ggctttgtgc atccattttt 000720
000721 catacagcat cgttgtagtc ttcaaataca aatatgatca cggcaatctg ctgaaaaatc tttggtggct ttcccttgct 000800
000801 cTTGGACAAT CCCTGATTGT CCAAGTTTTC GGCTTCATCT CGTTCGCCCA CCATACACTG AACTATAAAC TGTAGTGGCT 000880
000881 TTTTTTCCTC AGGTCTTCCC ACAGACTAAG TACCAAGATT TTTCCACCCT ACCCTCATCC GTGCTCATTC CGACACACTT 000960
000961 TTTGCCTGTT TGACACCTCA TTTATTGTCA GATTTCAAGA ATCGTTTTCT TCGGGGAACC ATTTCTTGAC TCCCTTACTG 001040
001041 GATGAAACAA GCCTCCCTGT TAAACAGtgt tggaggcgca gaaacatacc cccaaataat ggcgttttga catctgaact 001120
001121 gaagaagcct caaggtccca ctcccctaaa tccccacgcc atctctgcca aagcaaagga taaagtttag acacatcaca 001200
001201 aggaacataa ttgtttttgt tgcctccctg taagaccaag aatgtagtaa tcacacctga gcagaccctt tcacaagatg 001280
001281 ttgtacaaat taatgtgttc ctgatacatt cattctcctt tgtaatccct caacagaatt cctcttctcc ctatcataac 001360
001361 ctgtgtcgct gggattgtat ccacaagctt ctgaagccct ctgaggggtg ggtaatcacg ctgtgattct tcctgtgtat 001440
001441 acacgttaag taaatttgta tgttttttct attaatgttc ctcatgttag tgattttcag ccaaacctca gagggccaag 001520
001521 gagaaaggtc cccttggcgc ttacaATAGT GTCTGCTGGT AGTTTCATGT GGTTCTTGGT AGAACTTACC GGTTCAACTT 001600
001601 GTTCTTTCAC TATGTGTGTA TTTAGAGCTA AGCAAGTTTA Ctatatatgt gtatatatat atatatatac acacacacac 001680
001681 acatatacac atacgtatat gtatatacat atattatata tatatatatG cacagtaatg gttctgatca gttggcctaa 001760
001761 gagtacaccc tatgtggggc ttcacgtact gctacactca caggcagaat tgggggttgt ttttctgtcc agagtgattg 001840
001841 atcctgatta caaggggaca agcgggtttc ttctacataa aggagaattt tgtcaagaac ccaggagatt cactgagacc 001920
001921 ttttttagta cttccttgtc taatgtttcg ctgttggaaa actctgggaa cccaacaaag acaaggaagg aaggaaggtt 002000
002001 tgggctatcc ttctaggtaa agaatctagt ctagcgaggt cctgacaaag gctaagggta acttgaaaag gtgctaggag 002080
002081 aacagagtta tgcaatatta gctacCTAAT TTGCAGATta catatatatg tatacacata tacatatgtg tgtgtgtgtg 002160
002161 tgtgtgtgtg tatatatata taACTGCTCT TTAGCTGACA CCTTGATTTT AATAATAGTC Cttttctttt cttttttctt 002240
002241 tgagatgagg tcttgctcca ttacccaggc tggagtgcag tggcacaatc atagctcact acagactcaa actgctgtac 002320
002321 tcaagcagtc cttctgcctc agcttcccaa gtaggtagga ctgcaggcac acaccaccac acccagttaa ttttttctta 002400
002401 ttttttatTC TATCTATCTA TCCAtttatt tatttttgag acagagtctt gctctgttgc ccaggctgga gtgcagtggt 002480
002481 gtgatcacag ctcactgcag ccttgatctc ccaggctcaa ttgatcccct cgccacagtc tcctgaacag ctgggactac 002560
002561 aggtgcacac caccacgctc ggctaatata tatatttttt aatttttagt agacatgagg tctcactatg ttacccagac 002640
002641 ttgtctcaaa ctcctgagct taagctcttc tcctaccttg CAAGTTTATA Gtttttttaa aatatatttt atctccttga 002720
002721 ttgaaaactt cacgaaagca cactttgtgt atttttgcca gcatctggaa gatgtaaacc tatcgcacag cagatgttca 002800
002801 ataaatgttg agtgttgaGA CAAAACTTGC TTAATTTTTC AAGCAAGGTT TGGAAAATTA CCTCTTTATT TGTATTATAA 002880
002881 AAGAAGTCAA AACCCCTTTA CTAACTAGAT CTAGAAGAAA GTTTATGATG AGAGTAGATT ATTAGTAGTG CTTGATATTC 002960
002961 CAGGAGTTAT GTACAATTTT AATAGGCTTA AATAGACCAA ACTAACTCCC CACATTTAAA TTAGAATGAG AATCAATAGG 003040
003041 ATCTAATCTT ACCTTTTAAT GTAAAACAAT TTAATTATGC TCATTAGACA CATTTGCCTG AATTGTATCT TAATTTTAAC 003120
003121 TAAGTATAAT GAAAACCAGA GAGATCAAGA TTCCTGAATT TGCTGGATGC AGAAAATGAT AGGCTAACAA TTATATTTAA 003200
003201 CTGCTATATA ACATTGTTTC TAGCAGCTTC TCTTAACTCT TTGTTCTCTT TCAACTTTAA AAACAGTCCT CATTTAAGTA 003280
003281 TGGCAAAAAG AAAAAGCAGA AGGCGTTTCT TTTTTTAAAT ATAtttttat tatactttaa gttctagggt acatgtgcac 003360
003361 aacgtgcagg tttgttacat atgtatacat gtgccatgtt ggtgtgctgc acccattaac tcgtcattta cattagttat 003440
003441 atctcctaat gctatccctc ccccgtcccc caaccccaca acaggccccg gtgtgtgatg ttccccttcc agtgtccagg 003520
003521 tgttcccatt gttcaattcc cacctatgag tgaggacatg cggtgtttgg ttttttgtcc ttatgatagt ttgctgagaa 003600
003601 tgatggtttc cagcttcatc catgtcccta caaaggacat gaactcatca ttttttatgg ctgcatagta ttccatggtg 003680
003681 tatatgtgcc atattttctt aatccagtct atcattgttg gacatttggg ttggttccaa gtctttgcta ttgtgaatag 003760
003761 tgctgcaata aacatacgtg tgcatgtgtc tttatagcag catgatttat aatcctttga gtatataccc agtaatggga 003840
003841 tggctgggtc aaatggtatt tctagttcta gatccctgag gaatcgccac actgtcttcc acaatggttg aactagttta 003920
003921 cagtcccacc agcagtataa aagtgttcct gtttctccac gtcctctcca gcacctgatc tttgacaaac ctgacaaaaa 004000
004001 caagaaatgg ggaaaggatt tcctatttaa caaatggtgc tgggaaaact ggctagccat atgtagaaag ctgaaactgg 004080
004081 atcccttcct tacaccttat acaacaatta attcaagatg gattaaagac ttaaatatta gacctaaaac cataaaaacc 004160
004161 ctagaagaaa acctaggcaa taccatttag gacataggca tgggcaagga cttcatgtct aaaaacacca aaagcaatgg 004240
004241 caacaaaagc caaaattgac aaatgggatc tcattaaact aaagagcttc tgcacagcaa aagaaactac catcagagtg 004320
004321 aacaggcaac ctacagaatg ggagaaaatt tttgcaatct actcatctgg caaagggcta atatccagaa tctacaaaga 004400
004401 actcaaacaa atttacaaga agaaaacaac cccatcaaca aatgggcgaa ggatatgaac agacacttct taaaagaaga 004480
004481 catttttgca gccaacagac acatgaaaaa atgctcatca tcacttgcca tcagagaaat gcaaatcgaa accacaatga 004560
004561 gataccatct gacaccagtt agaatggtga tcattaaaaa gtcaggaaac aacaggtgca gaagGCATTT CTAACAGGTT 004640
004641 GACTGTGGTG CAGGAACATA GGGGAAGAAT GTAATGAGTT GCTAGTGTGG GAACCTCGCA GAGGTATCCC TGTGGCACAG 004720
004721 TGCCCTCTGG TGTTAGGAAG GTGTTCTTTC ACTATGTGTT TAGAGCTAAG CAAAGATCAC GGGAGCGTCC AACACATCTC 004800
004801 AGACCTAAAG CACAAAACAC TGTTATACAA CTTTTGTGTA TTTGCCAACA AAAAAAAACT TCTGATTTAC TCCCAGTGTT 004880
004881 ATAATTTATG CCCACtgtat taacccgttc tctgctatga agaaatacct gagactgggt aatttataaa ggaaagaagt 004960
004961 tgaattgact cacagttctg catggctggg gaagcattag gaaatttcca atcatggcag aaggtacctc ttcacagagc 005040
005041 agcaggagag aaaatgagtg ccagcagggg aaatgtcaga cacttataaa accatccgat ctcatgagac tcactcgtta 005120
005121 tcaggagaac agcatggggg aaactgcccc gtgatgcaat tacctacacc tggtcccacc cttgacacat ggggattatg 005200
005201 gtgattacaa ttcaagatga gattttgggt ggggacacag ccaaaccata tcaCCAACTA CCCTACATGC tttaaaaatt 005280
005281 ttttacatta ttttattttt tttattttat tttatttttt agagacaagg tcttgctttg ttgcccagct agtctcaaac 005360
005361 tcctggcctc aaatgatcct ctcaccttgg cctctcatgc tgggattata ggtgtgaacc accacactgg ccTCCTACAT 005440
005441 ACTTTTTAGG AAAGTGGCTG TCAATAGCTC TGCCTTGAGA AGTGAAGCAA AATTATGTGA TATGCTACAA ATAATGTTAC 005520
005521 AAATAATAGA AGTTTGTACA TAACCATCTC TCTATGGGTT TGGGGCAAAA GAGTCTTCTt cattatcaat ccttaattac 005600
005601 tcatttgaat aatttttgct tctggttcct acaaccttgg gctggatgat tttgaagaaa ctaatccctg agggaagaat 005680
005681 gcttctatca ggggcatagt catggttctg atcaactggc ctaagagtac accctatgtg gggcttcacg tactgctaca 005760
005761 ctcacaggca gaattgggat tgtttttctg gccagagtga ttgatcctga ttacaagagg acaaatgggt ttcttctaca 005840
005841 taaaggagag ttttgtcaag aacccaggag attcgttgag acatttttta gtacttcctt gtctaatatt ctgctgttgg 005920
005921 aaaactctgg gaacccaaca aagacaagga aggaaggaag gtttgggcta tccttctagg taaagaaccc agtctagcga 006000
006001 ggtcctgaca aaggctaagg gtaacttgaa taggtgctag aagaacagag ttatacaata TTAgctacat aatttgcaga 006080
006081 acccaatgca aaataaaaat gtagggctcc ttgttaattt caatctattt aataggcaca gtggagcagc aactaagtgt 006160
006161 agagcgcgct tctaagtatt gagtcctgtg tgactcccca ggttgtgcat ccatggagct ggTGCTAGTG CTATGATTGC 006240
006241 TAAATTAGCC CTCATGACCA GAAAGAAGTA TGGCCTGTAG AAGTTATGTT TTTTGTTACT TTTTTTTCCA CTCCCCCAAC 006320
006321 TTTTCCTTAT ATATGTATCA TATATAAAGA ATACTAGGAG TGGCTAACTT TTTACTTCTC GTGAGGGAAT ATGATTGAAT 006400
006401 CAAGATCACT CCATGATGAT ACACATTCTG AAGGGACTTC ATGTGTCCCT TGTGTTGGAG GCACACACTT TTCATGTGGA 006480
006481 TGAAAAGCTA TAGAGGATGT TGAAGGGGAA AAGGTGTGGC CTGTACCAAT GGACTGCTGG GCCATTGGCC TCCAGTTGCT 006560
006561 TCCAGCCAGT GAGACCCTCA GCAGGAGTTG GGAGGGAAGA AAACAAAATC AGGACATGTA TACCCCTGGC TCTTCCCAGG 006640
006641 AGGAGGTTGC CTTGTGCTGC TGATGTTTCA CAACCAAAGG TCACTGCTGA TCTCATAGCA ATAACTACAG AACACTTCCC 006720
006721 TTCTAGGTTC CAGCAAATGC TGGCTACCCT CACCCTGCCT GGCCTACATG TGGTTACAGA TTTCCCACAA TTACTATTTG 006800
006801 TAGGATCCTG ACTCCCTATA CTTCTCATCT GTTTTAAATA AACCCTCTTT AAATTACTCT AACCCGAGTG TGCCCTCTGT 006880
006881 TCTCTGTTGG AGCCCCGTGT GATATAAtca tgttcctcag ctataaaatg gtgatagaag taataaacct gattccagaa 006960
006961 cttgttggga ggataaaatg aaagtacaag tatacaaa
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Predicted Small Protein

Name NONHSAT100951_smProtein_4337:4633
Length 99
Molecular weight 11802.5709
Aromaticity 0.0714285714286
Instability index 40.6306122449
Isoelectric point 10.2232055664
Runs 9
Runs residual 0.0472057982071
Runs probability 0.020697167756
Amino acid sequence MGENFCNLLIWQRANIQNLQRTQTNLQEENNPINKWAKDMNRHFLKEDIFAANRHMKKCS
SSLAIREMQIETTMRYHLTPVRMVIIKKSGNNRCRRHF
Secondary structure LLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLL
LLHHHHHHHHHHHHHHLLLLEEEEEEEELLLLLLLLLL
PRMN -
PiMo -