NONHSAT100607
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT100607 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
585 nt |
Genomic location |
chr5-:16483106..16508795 |
Exon number |
2 |
Exons |
16483106..16483581,16508687..16508795 |
Genome context |
|
Sequence |
000001 ATTGTTTGGC CACATTAGCC GTGGTTAGCA GGTGCTGCAG CCTTTGCCAC TGTTATTATT TTTAAAGGGC AGAAATGCCT 000080
000081 GAAGGTGAAG ACTTTGGACC AGGCAAAAGC TGGGAAGTTA TCAATTCCAA ACCAGATGAA AGACCCAGGC TCAGCCACTG 000160 000161 TATTGCAGAA TCATGGATGA ATTTCAGCAT ATTTCTTCAA GAAATGTCTC TTTTTAAACA GCAGAGCCCT GGCAAGGCAA 000240 000241 GTTTTCCAGT AAAGGAGTAT GTTTTAAAAT GTTCAGTTAC TTGGAAACAA ATGAACTAAC CTATTTTATC AGCTTGTCAG 000320 000321 ATTTCTCCAA TTTTAAATAT AATATACTAA GAACATATGC CATAAAAGCT GGTATCAGCA AGGTTCAGAT GTGTGAGTGT 000400 000401 GCGAACACTA GATAATCCTC AGCCTCACAT TGTGAAATTG GATTGGTTTT ACATTTTATA TATATTTATC TAGCTCATTA 000480 000481 GCTAAAATGA ATGGTGATTG GTCTTATCAG CAAGACTAGG GAGAAAACAG TCTTAAGAAT TTCAGTTATC GTATTTAGCC 000560 000561 TGGTGCTGAA GTCAAAGGGA GATGA |
Predicted Small Protein
Name | NONHSAT100607_smProtein_74:298 |
Length | 75 |
Molecular weight | 8568.7502 |
Aromaticity | 0.121621621622 |
Instability index | 52.0121621622 |
Isoelectric point | 6.55279541016 |
Runs | 7 |
Runs residual | 0.0480553724456 |
Runs probability | 0.0396825396826 |
Amino acid sequence | MPEGEDFGPGKSWEVINSKPDERPRLSHCIAESWMNFSIFLQEMSLFKQQSPGKASFPVK EYVLKCSVTWKQMN |
Secondary structure | LLLLLLLLLLLLEEEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEE EEEEEEEEEEEELL |
PRMN | - |
PiMo | - |