NONHSAT100187

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT100187

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3107 nt

Genomic location

chr5-:6019142..6022396

Exon number

1

Exons

6019142..6022396

Genome context

Sequence
000001 ATATTTTCAG CATCACATTT TAAGAATAAT ATGTGAAATA CAATATGTTT TATTAGTCAC CTTTGGAAAA TACAGTCTTC 000080
000081 CACAATCTGG AACCACCTCT TTGGTTCAAA ATGTGCCATT CTTCTGTAAT GTGTGTGATA AACTTAAAAA AAATCTGTAT 000160
000161 CCTTTATCCT AATCATCTTA CTTGGACATC ATCCTGAAAC AAATGACAAA AACATTCACA GTTTTATATA CAAAGTTATT 000240
000241 GGTAACAATG TTCTTAATAG AATTCAATTA GAAAACATAT AAAGGCAAAG GTAGAGTTAT TTGATGTTAT GGTTTGAAAG 000320
000321 GATTCCCACA CCCTCATGAA TATTCTTTAT TATGCCAGAG GGAACCTAAT TCCCCTGCCT TTGAGTGTGG GATGGCATTG 000400
000401 ATGAGTTACT TGTACCACAT ATAATAGGCA GGAAGTGATG GCACGTGACA TTGGAAACAA CTTCGTAAAA GTCACCGAGA 000480
000481 CTCATTCCTT GCTTTCTCCT ATGTCTCCCA CCTGGCAGGA AGACATTTGC CATCATGTAA GGAGAGTTCT GCTTAGTGAG 000560
000561 GCATTGACAT CTCCAGCCAG CAGTGCCGTG AGGGAGGTGG GCAGCTCAAG CCTCAGTCAA ACCCTGAGAT GACCATGGTC 000640
000641 CCACTCAACA TCTCAGCTGT GACCATGTGG GAGAATCCAA GCCTGAGCCA ATCAGCCTAG CTGCTCCCAG AGTCCTGACT 000720
000721 CTCAGAAACC ATGCCAGATT ATACATATCT GCAGCTTTAA GCTTCTGAGA TTTTGGAATG ACTGATGACA GAGCAATAAA 000800
000801 TAACTAATAC ATTTCACCAC ATATCACTTA GCAGAATGCC ATGGAGCTAT TAAACACAAT ATTTTATGAA GATTAGTCTA 000880
000881 TGATATGGAG ATATACTCAC AATGTTATTA GCAACACAAC TAGACCAACT GAGTATAGGT AGTATAATCT CAATTTGTTC 000960
000961 TAAAAATATA AATCTGTACA AAGATAGAAA GACCAGAAGA AAAAAACCAT TTAATACTTG ATAGATAATT ACAATGGTAA 001040
001041 AGAATTTAGC CTTGATCACT TGATTTGAGA CGGAATCTAA CTTGCTAGCT GTATATCCAT AGTGTGGATG TGTAACCAAT 001120
001121 GATTTGTAAA CTAATTCTCA GTTTACTCGT CTATATAAAA GAGCTAGTAA TATTACCTAT TTCATGCGGC TTGGGAGAAA 001200
001201 TGAATCAATA ATATATAGAA GGGCTTAGTT CTCATATTGT GGCAAGTACT TCACAAATGA TAATTTTTAC TATTACAATT 001280
001281 TTTATAAGGC TTTCTGTAAT TCACAAATTT TCTAATATCT ATTTTATGAC TTTTGAAATA ATTCTTACAA TATCCCTTTT 001360
001361 AGTAACCTTT ATTACAAAAT CTATTGTAAT CTCTTAAAAT AATATTCCTT TTTGTTTTTC TCCGAGATAG TCTATCTAAT 001440
001441 GATGTTACAA TAGAGTTACC AACAAATGCC ATATTTCATT CCTGAGCGTC TATATTCTTG AGTTCCTAGC AACAAAGAAC 001520
001521 AAAGTAGCAA CCATTTCTTA AGAAAATGCT GAGATGGACA CCAGAGTTTC AAGCAATTTT CATCCAGAAG GTCACATGTT 001600
001601 AGGGGTAAAA GCTATATGGA ATCTTGAACA AGCATAGCAT CTAATAGCCT TATTTGATTA AAAAAATGAA TACACACAAA 001680
001681 AATTTTTTGA AGACTAACTA CCCCTTAGAA ATGTTCGTTA ACTTGGTCAG TCATATAAGC CTACCTCCCA TTTATTCAAT 001760
001761 AGATCAGGTA ACTCCCCTCT TTGTTATGAG CCCAGTTTTC TAGAGGTGGA CCAGATTCCA TCATATGTAC ATCACTCTGC 001840
001841 TAGTTGAGCT CTCTAAATGA AAACTTCAGC CGTAGCCACT GGATAGAAGA ATACAAGAAG GAATGCCAAC TTGAGGAGCA 001920
001921 AGTTGTGTTG AGTTCAGGCA TTGCTTTGGA GAATCTGCTT CTTCACCTGC TGGCTTACAG GGTTGGATGA CCTGAGGCAG 002000
002001 CAGCAGAAGT TTAGACAATT ACGGTTGGAT GATTCTTAAC TGTCCTAATC CCAAGTCCTC AATTTATAAG TGAGGAACTG 002080
002081 GAAAATCATT CACACAGCTA GCTGCAAGCA ATGACAGCCT TGGAGAGAAA TCAACCTGTG TACAGCTCAG TCCCATCTGA 002160
002161 GTTCTTTGGA GAACAAACTC CAGCAGCTAC TTCTAGAAAA TATAGACAGC ATATTCAGCC AATCTCCTGA GCTGGTGGGA 002240
002241 CATTTTTACA TGAACAAGGC CTCCCTCCAC ATGAATTGCA AAGATTCAGT GGACTTTGCA TGATTATTCT TCTAATCTTA 002320
002321 CATTAAGCTT TATTTTGGAT TTTAAAAAAA TCTGCCACGT GTAAGGGCAC CAATGTCCAC CAATATTGTT ATATAAAATA 002400
002401 ACATTATTAA TCCTTCCTGT TTATCTTTTA ATCAGAACTA AGAGGGATGG TGGATGATGA ATGCATGAGT CATACTTACT 002480
002481 TCATGATTCT ATAAATCCTA ATTTTCACTT TTTTAAAATA AAAATTGCAT GCAAACCAAA AAGAAGCTGC CTAAAACAGA 002560
002561 CGTGGAGATA CTCTACTTAG GTTTCCCAGG GAAAGACAAT TTTAAAAAAC AATTTTAGCA ACAAAAATAC ATGGGCAGGG 002640
002641 AATACACGCA TTTATTATCA TTTTTCCTCT TAAAGCAGCT ATGATGAGAC ACGTCCAAAA CACCTGCTCT TGTGTACTGC 002720
002721 CCAGTTTCAC GTGAGTTCTG TGGGATAACA CTGAATCCAC TCTTCAACTA CAGTGAGGAA GTGATAGAAC TGCTTCTGGC 002800
002801 ACACCAAAGA ACAGCACAGA GGTCCAAATA CATCTTCCTT AGGTGCCCAT GAATTTAAAT TTATTTCTGC TTTATCCTTT 002880
002881 AAAAAAAAAT CTAACGATTT CAAATGCCTT GCTGAAATCA ACACCCTCTG CAACAGCCCT CTCAGGATAG TTCATCCTAG 002960
002961 TAGGTCTGTC AAAACTGAAA CACCAACATG TGAGTTCCTC CTCTGGGTTT TAAATGTTAG TACTGTGACT ACTTCTTTGT 003040
003041 TTGTTTTCAC TTTTAATTGA CAAATAATAA CTGTATATGT TATACAGTAA ATCTGACGTT TTGATAT
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Predicted Small Protein

Name NONHSAT100187_smProtein_437:631
Length 65
Molecular weight 7034.881
Aromaticity 0.03125
Instability index 71.740625
Isoelectric point 6.81610107422
Runs 10
Runs residual 0.00765625
Runs probability 0.0435170464582
Amino acid sequence MARDIGNNFVKVTETHSLLSPMSPTWQEDICHHVRRVLLSEALTSPASSAVREVGSSSLS
QTLR
Secondary structure LLLLLLLLEEEEEELLLLLLLLLLLHHHHHHHHHHEEEHHHHLLLLLLHHHEEELLLLLL
LLLL
PRMN -
PiMo -